RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 POMZP3Q6PJE2 187 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 FCRL5Q96RD9 977 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 ZSCAN5AQ9BUG6 496 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF879B4DU55 563 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 MAB21L1Q13394 359 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF613Q6PF04 617 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 TFB2MQ9H5Q4 396 aaKnown RBP16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 MYOCOSA0A1B0GUC4 107 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 WWP2O00308 870 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 EEFSECP57772 596 aaKnown RBP16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 SMARCB1Q12824 385 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 SMARCD3Q6STE5 483 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 FAM110BQ8TC76 370 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 TNFAIP8L1Q8WVP5 186 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 C8orf48Q96LL4 319 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 ZFP3Q96NJ6 502 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 FZD8Q9H461 694 aa16.16■□□□□ 0.18
SH3RF1-201ENST00000284637 GABRDO14764 452 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 NIPSNAP2O75323 286 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 PRKACBP22694 351 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 TEAD4Q15561 434 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 GARNL3Q5VVW2 1013 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 RPS27LQ71UM5 84 aaKnown RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 STON2Q8WXE9 905 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 PTPN18Q99952 460 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 A0A1B0GVM2 712 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 AHSGP02765 367 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 CYP11A1P05108 521 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 PSKH1P11801 424 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 CD247P20963 164 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 RYKP34925 604 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 GSK3BP49841 420 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 MAZP56270 477 aaKnown RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 ZDHHC20Q5W0Z9 365 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 EPGNQ6UW88 154 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 USP50Q70EL3 339 aaPredicted RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 CADM2Q8N3J6 435 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 OR8D1Q8WZ84 308 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 TMEM209Q96SK2 561 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 PIGVQ9NUD9 493 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 POLR3BQ9NW08 1133 aaPredicted RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 PLCL2Q9UPR0 1127 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 GRM6O15303 877 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 ECHS1P30084 290 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 CDH4P55283 916 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 VBP1P61758 197 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 SRSF11Q05519 484 aaKnown RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF267Q14586 743 aaPredicted RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 TBC1D25Q3MII6 688 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 HMBOX1Q6NT76 420 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 ANKRD13BQ86YJ7 626 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 RELL1Q8IUW5 271 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 TRPV3Q8NET8 790 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 ANKRA2Q9H9E1 313 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 RDH8Q9NYR8 311 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 TBC1D24Q9ULP9 559 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 MAN2B2Q9Y2E5 1009 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 APOL3O95236 402 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 HLA-DQB2P05538 268 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 CYP3A5P20815 502 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 LARS2Q15031 903 aaKnown RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 ATXN7L2Q5T6C5 722 aaPredicted RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 CGREF1Q99674 301 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 DUSP26Q9BV47 211 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 FAM124BQ9H5Z6 455 aaPredicted RBP16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 TMEM27Q9HBJ8 222 aa16.15■□□□□ 0.18
SH3RF1-201ENST00000284637 CLIC3O95833 236 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 OAS1P00973 400 aaKnown RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 IFNA6P05013 189 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 ADH1AP07327 375 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 TARDBPQ13148 414 aaKnown RBP eCLIP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 TNFAIP8L2Q6P589 184 aaPredicted RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 ZC3HC1Q86WB0 502 aaKnown RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 POF1BQ8WVV4 589 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 PYCR2Q96C36 320 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 C1QTNF1Q9BXJ1 281 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 GALPQ9UBC7 116 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC2A6Q9UGQ3 507 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 NUP50Q9UKX7 468 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 SOWAHBA6NEL2 793 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC25A11Q02978 314 aaKnown RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 LAPTM5Q13571 262 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC35G1Q2M3R5 365 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 OGFRL1Q5TC84 451 aaPredicted RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 CCSAPQ6IQ19 270 aaPredicted RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 IGDCC3Q8IVU1 814 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF563Q8TA94 476 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 UCKL1Q9NWZ5 548 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF541Q9H0D2 1346 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 TRBV23OR9-2A0A075B6M9 112 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 ARL5CA6NH57 179 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 H0YJX3 145 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 FOXD2O60548 495 aaPredicted RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 HTR1BP28222 390 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 TAF1AQ15573 450 aaPredicted RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 FBXL20Q96IG2 436 aa16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 RPL10LQ96L21 214 aaKnown RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.17
SH3RF1-201ENST00000284637 RIIAD1A6NNX1 92 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms