RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GPATCH1Q9BRR8 931 aaKnown RBP17.49■□□□□ 0.39
CAPN1-201ENST00000279247 DPY30Q9C005 99 aa17.49■□□□□ 0.39
CAPN1-201ENST00000279247 THG1LQ9NWX6 298 aaKnown RBP17.49■□□□□ 0.39
CAPN1-201ENST00000279247 EIF3LQ9Y262 564 aaKnown RBP17.49■□□□□ 0.39
CAPN1-201ENST00000279247 EDDM13A0A1B0GTR0 161 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 FAM234BA2RU67 622 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 KRT6AP02538 564 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 KRT6BP04259 564 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 GJA4P35212 333 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 KRT6CP48668 564 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 IRF8Q02556 426 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 SELPLGQ14242 412 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 ELAVL3Q14576 367 aaKnown RBP17.48■□□□□ 0.39
CAPN1-201ENST00000279247 PDCD4Q53EL6 469 aaKnown RBP17.48■□□□□ 0.39
CAPN1-201ENST00000279247 PLEKHS1Q5SXH7 462 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 NANOGP8Q6NSW7 305 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 SUSD1Q6UWL2 747 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 NUS1Q96E22 293 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 VCX3BQ9H321 246 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 ALG2Q9H553 416 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 NANOGQ9H9S0 305 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 MRPL40Q9NQ50 206 aaKnown RBP17.48■□□□□ 0.39
CAPN1-201ENST00000279247 RIMS3Q9UJD0 308 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 DLGAP4Q9Y2H0 992 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 SLC16A8O95907 504 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 GSK3BP49841 420 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 STARD3Q14849 445 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 XKR6Q5GH73 641 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 C8orf82Q6P1X6 216 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-201ENST00000279247 ZFAND4Q86XD8 727 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 DTD2Q96FN9 168 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 EGLN2Q96KS0 407 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 APOLD1Q96LR9 279 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 KCTD14Q9BQ13 255 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-201ENST00000279247 C19orf43Q9BQ61 176 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 NTMT1Q9BV86 223 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 C6orf203Q9P0P8 240 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-201ENST00000279247 CCL27Q9Y4X3 112 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 ST14Q9Y5Y6 855 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 LRRK1Q38SD2 2015 aa17.48■□□□□ 0.39
CAPN1-201ENST00000279247 CXorf51AA0A1B0GTR3 108 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 RNASEH1O60930 286 aaKnown RBP17.47■□□□□ 0.39
CAPN1-201ENST00000279247 PCDH8O95206 1070 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 GSNP06396 782 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 GDI1P31150 447 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 RHDQ02161 417 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 MTX3Q5HYI7 312 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 ZFP1Q6P2D0 407 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 DNAJC11Q9NVH1 559 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 SMOXQ9NWM0 555 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 ZIM2Q9NZV7 527 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 DKK3Q9UBP4 350 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 KANSL1LA0AUZ9 987 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 SCAMP1O15126 338 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 TACR1P25103 407 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 DCDC1P59894 354 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 CNTN1Q12860 1018 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 RUNX3Q13761 415 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 TLR1Q15399 786 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 LDLRAP1Q5SW96 308 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 HACD2Q6Y1H2 254 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 PLA2G15Q8NCC3 412 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 TMEM125Q96AQ2 219 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 SLCO4A1Q96BD0 722 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 LRIG1Q96JA1 1093 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 SEPHS2Q99611 448 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 NRTNQ99748 197 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 CIB1Q99828 191 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 CFAP20Q9Y6A4 193 aaKnown RBP17.47■□□□□ 0.39
CAPN1-201ENST00000279247 KIF26AQ9ULI4 1882 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-201ENST00000279247 E7EQ34 232 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 H3BM21 787 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 KAT7O95251 611 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 EFNA1P20827 205 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-201ENST00000279247 OXTRP30559 389 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 OPRD1P41143 372 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 BLMHQ13867 455 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 TCEA2Q15560 299 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 CACHD1Q5VU97 1274 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 SYTL1Q8IYJ3 562 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 MINDY1Q8N5J2 469 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 ZBTB18Q99592 522 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 CCM2Q9BSQ5 444 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 TBCDQ9BTW9 1192 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 HEBP1Q9NRV9 189 aa17.47■□□□□ 0.39
CAPN1-201ENST00000279247 PRSS51A0A1B0GVH4 220 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 TSPAN11A1L157 253 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 SOBPA7XYQ1 873 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 GFYI3L273 518 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 SLC28A1O00337 649 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 IFRD1O00458 451 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 ARPC2O15144 300 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 DFNA5O60443 496 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 EEDO75530 441 aaKnown RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 SOD1P00441 154 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 PCCBP05166 539 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 TCF3P15923 654 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 CKMT2P17540 419 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 ITGB7P26010 798 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms