RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RFTN2Q52LD8 501 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 PYCR3Q53H96 274 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GPR107Q5VW38 600 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RNF219Q5W0B1 726 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 SULT1C3Q6IMI6 304 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CXorf57Q6NSI4 855 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 Q6ZNX1 250 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GET4Q7L5D6 327 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 FAM9CQ8IZT9 166 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 C8orf59Q8N0T1 100 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CLEC4FQ8N1N0 589 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 PJA1Q8NG27 643 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ZNF461Q8TAF7 563 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RNF217Q8TC41 542 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 MUS81Q96NY9 551 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CDK15Q96Q40 435 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 NTMT1Q9BV86 223 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CLPBQ9H078 707 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ING2Q9H160 280 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RDH14Q9HBH5 336 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 TBC1D23Q9NUY8 699 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 MYO10Q9HD67 2058 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ABCB7O75027 752 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 STC2O76061 302 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 PAPLNO95428 1278 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CD160O95971 181 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 KLKB1P03952 638 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RETP07949 1114 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 EBLN1P0CF75 366 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CORO1AP31146 461 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ARL1P40616 181 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GNPDA1P46926 289 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 STT3AP46977 705 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 PIK3CGP48736 1102 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ENTPD1P49961 510 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 HTR6P50406 440 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 MTPNP58546 118 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 AP1S1P61966 158 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 TOP3AQ13472 1001 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ABRAXAS2Q15018 415 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 MOGQ16653 247 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CDKL4Q5MAI5 379 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 CACHD1Q5VU97 1274 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 PTRHD1Q6GMV3 140 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 TMEM214Q6NUQ4 689 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RALGPS2Q86X27 583 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ZNF548Q8NEK5 533 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RAB2BQ8WUD1 216 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GTF2H4Q92759 462 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RBM4BQ9BQ04 359 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 RBM4Q9BWF3 364 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GPR63Q9BZJ6 419 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GPN2Q9H9Y4 310 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 BPIFA1Q9NP55 256 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 SARS2Q9NP81 518 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 DNMT3BQ9UBC3 853 aaKnown RBP12.63□□□□□ -0.39
C9orf3-201ENST00000277198 LHX3Q9UBR4 397 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 TRPS1Q9UHF7 1281 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 NEUROG3Q9Y4Z2 214 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 DOCK8Q8NF50 2099 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 GSTA4O15217 222 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 COCHO43405 550 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 SLC2A4P14672 509 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 ZNF12P17014 697 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 CCNA2P20248 432 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 CRHBPP24387 322 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 NFKBIAP25963 317 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 GSTM2P28161 218 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 PLCL1Q15111 1095 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 MAPKAPK3Q16644 382 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 RFX4Q33E94 735 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 ARMC12Q5T9G4 340 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 ATG9BQ674R7 924 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 ELMSAN1Q6PJG2 1045 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 SNX20Q7Z614 316 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 STK32CQ86UX6 486 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
C9orf3-201ENST00000277198 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 OSBPL10Q9BXB5 764 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 SLC29A3Q9BZD2 475 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 CD244Q9BZW8 370 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 CIPCQ9C0C6 399 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 FAIMQ9NVQ4 179 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 USP22Q9UPT9 525 aa12.62□□□□□ -0.39
C9orf3-201ENST00000277198 POLR3HQ9Y535 204 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-201ENST00000277198 TRBV5-4A0A0C4DH59 114 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ELOVL7A1L3X0 281 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PRRG1O14668 218 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 CBFA2T3O75081 653 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ULK1O75385 1050 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ERN1O75460 977 aaKnown RBP12.61□□□□□ -0.39
C9orf3-201ENST00000277198 INHBBP09529 407 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 MAPK8P45983 427 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PPP3CCP48454 512 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 HNRNPFP52597 415 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms