RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 L3MBTL4Q8NA19 623 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 OR56A3Q8NH54 315 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 CCDC138Q96M89 665 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 NRTNQ99748 197 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 DNAJC11Q9NVH1 559 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 KLQ9UEF7 1012 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 CAPN3P20807 821 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 MAT2AP31153 395 aaKnown RBP11.79□□□□□ -0.52
SDE2-201ENST00000272091 ERVK-8P63133 956 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 C8orf82Q6P1X6 216 aaPredicted RBP11.79□□□□□ -0.52
SDE2-201ENST00000272091 TRIM46Q7Z4K8 759 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 HORMAD1Q86X24 394 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 SIPA1Q96FS4 1042 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 CCT7Q99832 543 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 ACTL8Q9H568 366 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 WDR26Q9H7D7 661 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 FZD4Q9ULV1 537 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 SH2B3Q9UQQ2 575 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 TRIOBPQ9H2D6 2365 aa11.79□□□□□ -0.52
SDE2-201ENST00000272091 ASPDHA6ND91 283 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 CLDN9O95484 217 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 IL12AP29459 219 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 HMOX2P30519 316 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 TBL3Q12788 808 aaKnown RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 SMAD2Q15796 467 aaKnown RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 Q6ZS52 159 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 TRMT11Q7Z4G4 463 aaKnown RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 THOC6Q86W42 341 aaKnown RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 KYQ8NBH2 561 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 FAM3CQ92520 227 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 ZNHIT2Q9UHR6 403 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 PACSIN3Q9UKS6 424 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 CATP04040 527 aaKnown RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 GABRG2P18507 467 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 SNCBQ16143 134 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 GSTA3Q16772 222 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 MIER2Q8N344 545 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 CHCHD4Q8N4Q1 142 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 ZNF480Q8WV37 535 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 NUDT8Q8WV74 236 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 SLC29A3Q9BZD2 475 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 DPEP2Q9H4A9 486 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 PREBQ9HCU5 417 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 SLC2A4RGQ9NR83 387 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 C2orf42Q9NWW7 574 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 MMP17Q9ULZ9 603 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 LRP4O75096 1905 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 PRR19A6NJB7 356 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 E7EQ34 232 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 ANKRD28O15084 1053 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 PDYNP01213 254 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 SNRPB2P08579 225 aaKnown RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 IDO1P14902 403 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 MAP4P27816 1152 aaKnown RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 UFM1P61960 85 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 HMGCS1Q01581 520 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 USP30Q70CQ3 517 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 ZNF490Q9ULM2 529 aaPredicted RBP11.78□□□□□ -0.52
SDE2-201ENST00000272091 PCDHGA7Q9Y5G6 932 aa11.78□□□□□ -0.52
SDE2-201ENST00000272091 RSL1D1O76021 490 aaKnown RBP11.77□□□□□ -0.52
SDE2-201ENST00000272091 CEACAM5P06731 702 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 MYCLP1P12525 358 aaPredicted RBP11.77□□□□□ -0.52
SDE2-201ENST00000272091 GLULP15104 373 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 ACSL1P33121 698 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 YBX1P67809 324 aaKnown RBP11.77□□□□□ -0.52
SDE2-201ENST00000272091 NAE1Q13564 534 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 CPSF6Q16630 551 aaKnown RBP eCLIP11.77□□□□□ -0.52
SDE2-201ENST00000272091 RIPOR1Q6ZS17 1223 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 NET1Q7Z628 596 aaPredicted RBP11.77□□□□□ -0.52
SDE2-201ENST00000272091 PDZD3Q86UT5 571 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 HPS6Q86YV9 775 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 RNF175Q8N4F7 328 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 MTFMTQ96DP5 389 aaKnown RBP11.77□□□□□ -0.52
SDE2-201ENST00000272091 ACPTQ9BZG2 426 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 RIC8BQ9NVN3 520 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 SCML1Q9UN30 329 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 TRIOO75962 3097 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 PLXND1Q9Y4D7 1925 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 TCRBV21S2A2A0A5A6 115 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 MTTPP55157 894 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 MAP7D1Q3KQU3 841 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 Q7L0L9 218 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 AMZ2Q86W34 360 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 RGL4Q8IZJ4 473 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 MYOCQ99972 504 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 ACTR8Q9H981 624 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 MRPL40Q9NQ50 206 aaKnown RBP11.77□□□□□ -0.52
SDE2-201ENST00000272091 MAP10Q9P2G4 905 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 EBF1Q9UH73 591 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 PLEKHM1Q9Y4G2 1056 aa11.77□□□□□ -0.52
SDE2-201ENST00000272091 TBC1D3DA0A087WVF3 549 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3IA0A087WXS9 549 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3EA0A087X179 549 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3KA0A087X1G2 549 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3FA6NER0 549 aaPredicted RBP11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3LB9A6J9 549 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms