RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TFGQ92734 400 aaPredicted RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 NSL1Q96IY1 281 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 GPR174Q9BXC1 333 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 ZNF385DQ9H6B1 395 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 MRGBPQ9NV56 204 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 DNAJC11Q9NVH1 559 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 ARL8BQ9NVJ2 186 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 TRPS1Q9UHF7 1281 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 TIMM22Q9Y584 194 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 KRT87PA6NCN2 255 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 H0Y8X5 98 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 IFRD1O00458 451 aaPredicted RBP13.72□□□□□ -0.21
SS18-201ENST00000269137 WDR47O94967 919 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 CBX6O95503 412 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 RPN2P04844 631 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 CAPN1P07384 714 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 IMPA1P29218 277 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 RABIFP47224 123 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 NCALDP61601 193 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 PCDH1Q08174 1060 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 RNF165Q6ZSG1 346 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 BIRC7Q96CA5 298 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 PTCD3Q96EY7 689 aaKnown RBP13.72□□□□□ -0.21
SS18-201ENST00000269137 C3orf30Q96M34 536 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 CDK15Q96Q40 435 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 OR2M4Q96R27 311 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 IER2Q9BTL4 223 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 ATG10Q9H0Y0 220 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 PCED1AQ9H1Q7 454 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 MRPL40Q9NQ50 206 aaKnown RBP13.72□□□□□ -0.21
SS18-201ENST00000269137 SLC22A14Q9Y267 594 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 ASF1AQ9Y294 204 aa13.72□□□□□ -0.21
SS18-201ENST00000269137 PRR5-ARHGAP8B1AHC4 643 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 CLDN9O95484 217 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 HGFP14210 728 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 GNPDA1P46926 289 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 RASSF2P50749 326 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 ACTN3Q08043 901 aaPredicted RBP13.71□□□□□ -0.21
SS18-201ENST00000269137 NAE1Q13564 534 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 GGTA1PQ4G0N0 100 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 XKR7Q5GH72 579 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 ENPP7Q6UWV6 458 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 DCUN1D3Q8IWE4 304 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 DDIASQ8IXT1 998 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 DCBLD1Q8N8Z6 715 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 OR5K2Q8NHB8 316 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 ZNF480Q8WV37 535 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 OR1E3Q8WZA6 343 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 RAD51AP1Q96B01 352 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 PYCR2Q96C36 320 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 MAGEB10Q96LZ2 347 aaPredicted RBP13.71□□□□□ -0.21
SS18-201ENST00000269137 SLC29A3Q9BZD2 475 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 CARS2Q9HA77 564 aaKnown RBP13.71□□□□□ -0.21
SS18-201ENST00000269137 LNPEPQ9UIQ6 1025 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.71□□□□□ -0.21
SS18-201ENST00000269137 SIT1Q9Y3P8 196 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.21
SS18-201ENST00000269137 STK25O00506 426 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 DCXO43602 365 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 IDSP22304 550 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 CALB2P22676 271 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 ARL1P40616 181 aaPredicted RBP13.71□□□□□ -0.22
SS18-201ENST00000269137 CLCNKAP51800 687 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 THOP1P52888 689 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 MTAPQ13126 283 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 TPRG1LQ5T0D9 272 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 FAM219BQ5XKK7 198 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 TMEM198Q66K66 360 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 Q6ZSR6 202 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 THOC6Q86W42 341 aaKnown RBP13.71□□□□□ -0.22
SS18-201ENST00000269137 L3MBTL4Q8NA19 623 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 FAM174AQ8TBP5 190 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 RLN3Q8WXF3 142 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 TPSD1Q9BZJ3 242 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 AKTIPQ9H8T0 292 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 INTS7Q9NVH2 962 aaKnown RBP13.71□□□□□ -0.22
SS18-201ENST00000269137 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 PSMD13Q9UNM6 376 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 KCNK6Q9Y257 313 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 RNF11Q9Y3C5 154 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 CAPN7Q9Y6W3 813 aa13.71□□□□□ -0.22
SS18-201ENST00000269137 GON4LQ3T8J9 2241 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 A0A1W2PPC4 97 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 UGDHO60701 494 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 DNAJC8O75937 253 aaPredicted RBP13.7□□□□□ -0.22
SS18-201ENST00000269137 LINC00032P0C843 101 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 ITPKAP23677 461 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 PRDX6P30041 224 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 HMOX2P30519 316 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 HSD17B2P37059 387 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 KLF10Q13118 480 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 LRP8Q14114 963 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 GRB7Q14451 532 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 ARHGAP19Q14CB8 494 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
SS18-201ENST00000269137 ASRGL1Q7L266 308 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms