RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TIMM29Q9BSF4 260 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 SLC29A3Q9BZD2 475 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 LMAN1LQ9HAT1 526 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 FZD3Q9NPG1 666 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 TM7SF3Q9NS93 570 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.93■□□□□ 0.14
TPM1-201ENST00000267996 RNF11Q9Y3C5 154 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 KCNE1BA0A087WTH5 132 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 CACNB4O00305 520 aaPredicted RBP15.92■□□□□ 0.14
TPM1-201ENST00000267996 KCNJ13O60928 360 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 CLDN9O95484 217 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 SLC16A8O95907 504 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 CD1EP15812 388 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 HMOX2P30519 316 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 MRPL19P49406 292 aaKnown RBP15.92■□□□□ 0.14
TPM1-201ENST00000267996 HTR6P50406 440 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 STARD6P59095 220 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 KIAA1024LP59773 190 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 TFF2Q03403 129 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 Q6ZSR9 355 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 SPATA19Q7Z5L4 167 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 ADHFE1Q8IWW8 467 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 L3MBTL4Q8NA19 623 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 OR2T11Q8NH01 316 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 PYCR2Q96C36 320 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 UHRF1Q96T88 793 aaPredicted RBP15.92■□□□□ 0.14
TPM1-201ENST00000267996 ATG10Q9H0Y0 220 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 WNT16Q9UBV4 365 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 ZNHIT2Q9UHR6 403 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 SLC22A14Q9Y267 594 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 MRPS17Q9Y2R5 130 aaKnown RBP15.92■□□□□ 0.14
TPM1-201ENST00000267996 KRBA1A5PL33 1030 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 PRAMEF4O60810 478 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 ELF3P78545 371 aaPredicted RBP15.92■□□□□ 0.14
TPM1-201ENST00000267996 GAS6Q14393 721 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 PYCR3Q53H96 274 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 PRAMEF9Q5VWM5 478 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 SCIMPQ6UWF3 145 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 LONP2Q86WA8 852 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 SNX31Q8N9S9 440 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 FLCNQ8NFG4 579 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 OR9A1PQ8NGU1 263 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 USP7Q93009 1102 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 MAGEB10Q96LZ2 347 aaPredicted RBP15.92■□□□□ 0.14
TPM1-201ENST00000267996 RTKNQ9BST9 563 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 INTS7Q9NVH2 962 aaKnown RBP15.92■□□□□ 0.14
TPM1-201ENST00000267996 RIC8BQ9NVN3 520 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 GIMAP2Q9UG22 337 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 ACSL5Q9ULC5 683 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 CCL27Q9Y4X3 112 aa15.92■□□□□ 0.14
TPM1-201ENST00000267996 LOC100653049A0A140TA62 436 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 POM121BA6NF01 834 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 KRT34O76011 436 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 SEMA4FO95754 770 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 HNRNPA2B1P22626 353 aaKnown RBP15.91■□□□□ 0.14
TPM1-201ENST00000267996 ITPKAP23677 461 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 ARL1P40616 181 aaPredicted RBP15.91■□□□□ 0.14
TPM1-201ENST00000267996 ACADVLP49748 655 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 ZP2Q05996 745 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 NAE1Q13564 534 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 ABRAXAS2Q15018 415 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 DNAL1Q4LDG9 190 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 TMEM31Q5JXX7 168 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 CAPRIN2Q6IMN6 1127 aaKnown RBP15.91■□□□□ 0.14
TPM1-201ENST00000267996 IL27RAQ6UWB1 636 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 TRIM46Q7Z4K8 759 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 THOC6Q86W42 341 aaKnown RBP15.91■□□□□ 0.14
TPM1-201ENST00000267996 SNX32Q86XE0 403 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 SPDYE1Q8NFV5 336 aaPredicted RBP15.91■□□□□ 0.14
TPM1-201ENST00000267996 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 ZNF480Q8WV37 535 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 BMFQ96LC9 184 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 ACTR8Q9H981 624 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 LTB4R2Q9NPC1 389 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 C2orf42Q9NWW7 574 aa15.91■□□□□ 0.14
TPM1-201ENST00000267996 PSMD12O00232 456 aaPredicted RBP15.9■□□□□ 0.14
TPM1-201ENST00000267996 MANBAO00462 879 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 FPGTO14772 594 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 UGDHO60701 494 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 WFS1O76024 890 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 GPX3P22352 226 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 CCR5P51681 352 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 GRIK2Q13002 908 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 CYLC2Q14093 348 aaPredicted RBP15.9■□□□□ 0.14
TPM1-201ENST00000267996 GSTA3Q16772 222 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 LRRC56Q8IYG6 542 aaPredicted RBP15.9■□□□□ 0.14
TPM1-201ENST00000267996 C10orf67Q8IYJ2 551 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 SFRP1Q8N474 314 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 TFGQ92734 400 aaPredicted RBP15.9■□□□□ 0.14
TPM1-201ENST00000267996 SHDQ96IW2 340 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 OR4K3Q96R72 315 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 MYOCQ99972 504 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 SGPP1Q9BX95 441 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 MMADHCQ9H3L0 296 aaPredicted RBP15.9■□□□□ 0.14
TPM1-201ENST00000267996 SDR39U1Q9NRG7 319 aaPredicted RBP15.9■□□□□ 0.14
TPM1-201ENST00000267996 GPR45Q9Y5Y3 372 aa15.9■□□□□ 0.14
TPM1-201ENST00000267996 PEX11AO75192 247 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 CLDN2P57739 230 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 ERVK-8P63133 956 aa15.89■□□□□ 0.13
TPM1-201ENST00000267996 E2F2Q14209 437 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms