RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 NCSTNQ92542 709 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 MRPS23Q9Y3D9 190 aaKnown RBP11.89□□□□□ -0.51
SRRM4-201ENST00000267260 XKP51811 444 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 SLC13A2Q13183 592 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 HECTD2Q5U5R9 776 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 SLC30A10Q6XR72 485 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 TCEAL7Q9BRU2 100 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 SLCO1B3Q9NPD5 702 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 CMAHPQ9Y471 501 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 CSTF2P33240 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
SRRM4-201ENST00000267260 TRAM1Q15629 374 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF550Q7Z398 422 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 BTN2A3PQ96KV6 586 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 TM6SF2Q9BZW4 377 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 MANSC4A6NHS7 340 aaPredicted RBP11.89□□□□□ -0.51
SRRM4-201ENST00000267260 LATS1O95835 1130 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 CSTBP04080 98 aaKnown RBP11.89□□□□□ -0.51
SRRM4-201ENST00000267260 RAB4AP20338 218 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 CD72P21854 359 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 DNAJA1P31689 397 aaKnown RBP11.89□□□□□ -0.51
SRRM4-201ENST00000267260 SEMA5AQ13591 1074 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 RAB39AQ14964 217 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 MSANTD2Q6P1R3 559 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
SRRM4-201ENST00000267260 DUSP16Q9BY84 665 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 MIR1-1HGQ9H1L0 117 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 DCSTAMPQ9H295 470 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
SRRM4-201ENST00000267260 GLYATL1P3A0A0U1RQE8 302 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 ADAMTS3O15072 1205 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 LCP2Q13094 533 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 MAD2L1BPQ15013 274 aaPredicted RBP11.88□□□□□ -0.51
SRRM4-201ENST00000267260 MTFR2Q6P444 385 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 MALSU1Q96EH3 234 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 B3GAT2Q9NPZ5 323 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 TRIM36Q9NQ86 728 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 IFT52Q9Y366 437 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 WASF2Q9Y6W5 498 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CYP11A1P05108 521 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CPN2P22792 545 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CDKN2CP42773 168 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CDK18Q07002 472 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 GNMTQ14749 295 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CACUL1Q86Y37 369 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 KLHL6Q8WZ60 621 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 NPHS1O60500 1241 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 LGR5O75473 907 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 ALPPP05187 535 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 SMSP52788 366 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 PPATQ06203 517 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 FAM43BQ6ZT52 329 aaPredicted RBP11.88□□□□□ -0.51
SRRM4-201ENST00000267260 LRTOMTQ8WZ04 291 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 IFT27Q9BW83 186 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 LHX5Q9H2C1 402 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 NOX1Q9Y5S8 564 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF726A6NNF4 738 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CXCL11O14625 94 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 HSPA12AO43301 675 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 HMGN1P05114 100 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 RYKP34925 604 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CTBP2P56545 445 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 OR5K1Q8NHB7 308 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 RNF121Q9H920 327 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 PNPOQ9NVS9 261 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
SRRM4-201ENST00000267260 RHPN2P1A8MT19 583 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 B3GALT2O43825 422 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 ALDH3B2P48448 385 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 TARDBPQ13148 414 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRRM4-201ENST00000267260 UAP1L1Q3KQV9 507 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 WSCD1Q658N2 575 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 POMZP3Q6PJE2 187 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 TMED4Q7Z7H5 227 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 MRPL45Q9BRJ2 306 aaKnown RBP11.88□□□□□ -0.51
SRRM4-201ENST00000267260 SERINC1Q9NRX5 453 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 PTCH2Q9Y6C5 1203 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 OTOFQ9HC10 1997 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 A0A1B0GVM2 712 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 TCAF2A6NFQ2 919 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 DUXAA6NLW8 204 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 POLR1CO15160 346 aaPredicted RBP11.88□□□□□ -0.51
SRRM4-201ENST00000267260 VIPP01282 170 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 GSTM3P21266 225 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 ABHD13Q7L211 337 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 SUN3Q8TAQ9 357 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 SSX3Q99909 188 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 CORO1BQ9BR76 489 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 EBF3Q9H4W6 596 aa11.88□□□□□ -0.51
SRRM4-201ENST00000267260 AGO3Q9H9G7 860 aaKnown RBP11.88□□□□□ -0.51
SRRM4-201ENST00000267260 ANXA4P09525 319 aaPredicted RBP11.87□□□□□ -0.51
SRRM4-201ENST00000267260 MAGEA11P43364 429 aa11.87□□□□□ -0.51
SRRM4-201ENST00000267260 CDH12P55289 794 aa11.87□□□□□ -0.51
SRRM4-201ENST00000267260 TGFB2P61812 414 aa11.87□□□□□ -0.51
SRRM4-201ENST00000267260 NKX6-1P78426 367 aaPredicted RBP11.87□□□□□ -0.51
SRRM4-201ENST00000267260 MVKQ03426 396 aa11.87□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF792Q3KQV3 632 aa11.87□□□□□ -0.51
SRRM4-201ENST00000267260 FOXR2Q6PJQ5 311 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms