RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TNIP2Q8NFZ5 429 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 OR8J3Q8NGG0 315 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 GTF2H4Q92759 462 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 SCRN2Q96FV2 425 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 LMLNQ96KR4 655 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 LYSMD1Q96S90 227 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 ACTR8Q9H981 624 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.6□□□□□ -0.39
CPSF6-201ENST00000266679 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 MBD1Q9UIS9 605 aaPredicted RBP12.6□□□□□ -0.39
CPSF6-201ENST00000266679 PDE10AQ9Y233 779 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 CCL26Q9Y258 94 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 A0A1B0GVG6 124 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 ABHD14A-ACY1A0A1B0GW23 586 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 KRT87PA6NCN2 255 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 GMNNO75496 209 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 CLDN9O95484 217 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 PDYNP01213 254 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 C8AP07357 584 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 CBSLP0DN79 551 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 CDH2P19022 906 aaPredicted RBP12.6□□□□□ -0.39
CPSF6-201ENST00000266679 EPORP19235 508 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 CBSP35520 551 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 RPIAP49247 311 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 HSPA14Q0VDF9 509 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 MAPKAPK3Q16644 382 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 GTDC1Q4AE62 458 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 OTUD3Q5T2D3 398 aaPredicted RBP12.6□□□□□ -0.39
CPSF6-201ENST00000266679 DPY19L3Q6ZPD9 716 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 LPCAT2Q7L5N7 544 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 TRIM46Q7Z4K8 759 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 CHST14Q8NCH0 376 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 OR2T12Q8NG77 320 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 OR10A6Q8NH74 314 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 FBXO30Q8TB52 745 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 ZNF583Q96ND8 569 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 THUMPD3Q9BV44 507 aaKnown RBP12.6□□□□□ -0.39
CPSF6-201ENST00000266679 SLC46A2Q9BY10 475 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 SLC29A3Q9BZD2 475 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 ACPTQ9BZG2 426 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 ZBP1Q9H171 429 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 IKZF5Q9H5V7 419 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 CARS2Q9HA77 564 aaKnown RBP12.6□□□□□ -0.39
CPSF6-201ENST00000266679 C8orf4Q9NR00 106 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 DDX18Q9NVP1 670 aaKnown RBP12.6□□□□□ -0.39
CPSF6-201ENST00000266679 B4GALT6Q9UBX8 382 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 SLC25A13Q9UJS0 675 aa12.6□□□□□ -0.39
CPSF6-201ENST00000266679 AGAP14A8MT82 685 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 CCL16O15467 120 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 LILRB3O75022 631 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 BMP10O95393 424 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 PGRP06401 933 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 OR56A5P0C7T3 313 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 PCSK6P29122 969 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 SLC5A2P31639 672 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 TUBA4AP68366 448 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 TFF2Q03403 129 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 BOP1Q14137 746 aaKnown RBP12.59□□□□□ -0.39
CPSF6-201ENST00000266679 FAM98BQ52LJ0 330 aaKnown RBP12.59□□□□□ -0.39
CPSF6-201ENST00000266679 AP1ARQ63HQ0 302 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 ENPP6Q6UWR7 440 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 Q6ZVU0 165 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 FAM86B1Q8N7N1 296 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 USP7Q93009 1102 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 YME1L1Q96TA2 773 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 TBCDQ9BTW9 1192 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 BDH2Q9BUT1 245 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 CLMPQ9H6B4 373 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 C1orf109Q9NX04 203 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 SLC25A37Q9NYZ2 338 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 RSL24D1Q9UHA3 163 aaKnown RBP12.59□□□□□ -0.39
CPSF6-201ENST00000266679 MTCH2Q9Y6C9 303 aa12.59□□□□□ -0.39
CPSF6-201ENST00000266679 A0A087WXM4 84 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 LINC01553A4QN01 128 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 NEDD8-MDP1E9PL57 170 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 TULP3O75386 442 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 MTX2O75431 263 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 KRT6AP02538 564 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 KRT6BP04259 564 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 C7P10643 843 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 BCKDHAP12694 445 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 CALRP27797 417 aaKnown RBP12.58□□□□□ -0.39
CPSF6-201ENST00000266679 KRT6CP48668 564 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 PTPN5P54829 565 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 CHRNB3Q05901 458 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 SKIV2LQ15477 1246 aaKnown RBP12.58□□□□□ -0.39
CPSF6-201ENST00000266679 SMU1Q2TAY7 513 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 ZIK1Q3SY52 487 aaPredicted RBP12.58□□□□□ -0.39
CPSF6-201ENST00000266679 USP39Q53GS9 565 aaKnown RBP12.58□□□□□ -0.39
CPSF6-201ENST00000266679 CYBRD1Q53TN4 286 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 CARD16Q5EG05 197 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 RNF165Q6ZSG1 346 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 VRK3Q8IV63 474 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 ZNF548Q8NEK5 533 aaPredicted RBP12.58□□□□□ -0.39
CPSF6-201ENST00000266679 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 TMBIM1Q969X1 311 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 MCCC1Q96RQ3 725 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms