RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 HECTD1Q9ULT8 2610 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 TMEM229AB2RXF0 380 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 F8W8V4 182 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 ARHGAP6O43182 974 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 PDGFAP04085 211 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 CAPN1P07384 714 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 APRTP07741 180 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 CHRM5P08912 532 aaPredicted RBP9.4□□□□□ -0.9
VPS41-201ENST00000265745 ZSCAN5DPP0CG00 497 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 UGT2B7P16662 529 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 CYP2A7P20853 494 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 MAPK1P28482 360 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 SHMT2P34897 504 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 RPL22P35268 128 aaKnown RBP9.4□□□□□ -0.9
VPS41-201ENST00000265745 ITGA1P56199 1179 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 SIX1Q15475 284 aaPredicted RBP9.4□□□□□ -0.9
VPS41-201ENST00000265745 ZIC1Q15915 447 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 DRICH1Q6PGQ1 229 aaPredicted RBP9.4□□□□□ -0.9
VPS41-201ENST00000265745 AFTPHQ6ULP2 937 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 ASB18Q6ZVZ8 466 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 TRIM73Q86UV7 250 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 ENDOVQ8N8Q3 282 aaKnown RBP9.4□□□□□ -0.9
VPS41-201ENST00000265745 CCDC89Q8N998 374 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 TEX19Q8NA77 164 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 OR6P1Q8NGX9 317 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 OR5K2Q8NHB8 316 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 ADAMTS17Q8TE56 1095 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 PEX13Q92968 403 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 CLIP3Q96DZ5 547 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 TCTN2Q96GX1 697 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 CHRNA10Q9GZZ6 450 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 ING2Q9H160 280 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 MLXIPLQ9NP71 852 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 CHRAC1Q9NRG0 131 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 SPHK1Q9NYA1 384 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 PAK5Q9P286 719 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 TCFL5Q9UL49 500 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 SNX7Q9UNH6 387 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 CDYLQ9Y232 598 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 DRG1Q9Y295 367 aaKnown RBP9.4□□□□□ -0.9
VPS41-201ENST00000265745 TCAF1Q9Y4C2 921 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.9
VPS41-201ENST00000265745 IQCF5A8MTL0 148 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 E7EQ34 232 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 H3BMH7 237 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 ZNF749O43361 778 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 HCRTR1O43613 425 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 GPC4O75487 556 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 HBQ1P09105 142 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 CCR7P32248 378 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 PPARGP37231 505 aaPredicted RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 GABRA4P48169 554 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 PRAMEP78395 509 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 HSPA14Q0VDF9 509 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 SEMA3AQ14563 771 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 PTCHD3Q3KNS1 767 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 SYTL3Q4VX76 610 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 FASTKD1Q53R41 847 aaKnown RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 DNAJC21Q5F1R6 531 aaKnown RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 PCID2Q5JVF3 399 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 COLEC12Q5KU26 742 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 FAM69BQ5VUD6 431 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 ZNF385CQ66K41 422 aaPredicted RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 FAM198BQ6UWH4 519 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 ZNF662Q6ZS27 426 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 HOOK3Q86VS8 718 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 VRK3Q8IV63 474 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 SYTL1Q8IYJ3 562 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 GPR135Q8IZ08 494 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 SLC22A15Q8IZD6 547 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 C19orf47Q8N9M1 422 aaKnown RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 ASZ1Q8WWH4 475 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 DPH2Q9BQC3 489 aaPredicted RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 CARD6Q9BX69 1037 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 AP1M1Q9BXS5 423 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 IGSF5Q9NSI5 407 aa9.39□□□□□ -0.91
VPS41-201ENST00000265745 TDRKHQ9Y2W6 561 aaKnown RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 PCDHGA9Q9Y5G4 932 aaKnown RBP9.39□□□□□ -0.91
VPS41-201ENST00000265745 A0A0J9YY10 115 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 ARGFXA6NJG6 315 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 GOLGA6L6A8MZA4 724 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 PRMT5O14744 637 aaPredicted RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 KLF7O75840 302 aaPredicted RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 OR2B3O76000 313 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 SLCO2B1O94956 709 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 AOAHP28039 575 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 PTGIRP43119 386 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 CCL11P51671 97 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 CSE1LP55060 971 aaKnown RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 SESN2P58004 480 aaPredicted RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 CHAF1BQ13112 559 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 NAA30Q147X3 362 aaPredicted RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 KIR2DS3Q14952 304 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 NCF4Q15080 339 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 KYNUQ16719 465 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 AARS2Q5JTZ9 985 aaKnown RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 PAPD7Q5XG87 772 aaKnown RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 CPZQ66K79 652 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 C4orf22Q6V702 233 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 LDB1Q86U70 411 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms