RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CHPFQ8IZ52 775 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 CCNYQ8ND76 341 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ANKRD49Q8WVL7 239 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 EXT2Q93063 718 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 SLC38A4Q969I6 547 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 PTERQ96BW5 349 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 NSMCE2Q96MF7 247 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 LPIN3Q9BQK8 851 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 SLC35C2Q9NQQ7 365 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 FARSBQ9NSD9 589 aaKnown RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 ENOPH1Q9UHY7 261 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 WDR90Q96KV7 1748 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ZBTB42B2RXF5 422 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 H0YCG3 227 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 UBXN8O00124 270 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 TNFRSF21O75509 655 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 TNNC2P02585 160 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 APOA4P06727 396 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ADRA2AP08913 450 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 SSTR4P31391 388 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 UGT2B10P36537 528 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 KIR2DL3P43628 341 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 MAP2K6P52564 334 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 PRKCZQ05513 592 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ZNF33BQ06732 778 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 COX10Q12887 443 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 TNK1Q13470 666 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ZNF699Q32M78 642 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 SETMARQ53H47 684 aaPredicted RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 ARMC4Q5T2S8 1044 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 BRAT1Q6PJG6 821 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 FAM217AQ8IXS0 508 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 TIGD4Q8IY51 512 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ITFG1Q8TB96 612 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 TMCO6Q96DC7 493 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 MRGPRX2Q96LB1 330 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 C11orf54Q9H0W9 315 aaPredicted RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 CXCL16Q9H2A7 254 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 CDCP1Q9H5V8 836 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 CCSER2Q9H7U1 834 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 LRRC4Q9HBW1 653 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 SLC2A6Q9UGQ3 507 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ADGRE2Q9UHX3 823 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 GRIP1Q9Y3R0 1128 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 V9GYH0 126 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 FAM95CA0A1B0GW59 222 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 MANSC4A6NHS7 340 aaPredicted RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 RGS10O43665 173 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 SGTAO43765 313 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CDK14O94921 469 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 PFKMP08237 780 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 DCTP40126 519 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 SMSP52788 366 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 TRIM60Q495X7 471 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 PAN2Q504Q3 1202 aaKnown RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 SPANXN2Q5MJ10 180 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 SLFN12LQ6IEE8 588 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 PRSS42Q7Z5A4 293 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 MIER2Q8N344 545 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CAMKK1Q8N5S9 505 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 DNASE1L2Q92874 299 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ZNF566Q969W8 418 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 KIF12Q96FN5 646 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 KLHL15Q96M94 604 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 TBCDQ9BTW9 1192 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 MLPHQ9BV36 600 aaPredicted RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 NIFKQ9BYG3 293 aaKnown RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 LHX5Q9H2C1 402 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 DCAF16Q9NXF7 216 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 NEUROG3Q9Y4Z2 214 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CEP290O15078 2479 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 SYN3O14994 580 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 RGS5O15539 181 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 FAM20BO75063 409 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 PMPCBO75439 489 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 WBP4O75554 376 aaKnown RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 SUPT7LO94864 414 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 C22orf31O95567 290 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CYP11A1P05108 521 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 STAG3L1P0CL83 205 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 RAP2AP10114 183 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ACADMP11310 421 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 HGFP14210 728 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 JUNDP17535 347 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 ARF4P18085 180 aaPredicted RBP8.58□□□□□ -1.04
VAPB-201ENST00000265619 MYL9P24844 172 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 HNF4AP41235 474 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 SLC19A1P41440 591 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 RAB10P61026 200 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 TEKQ02763 1124 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 GRB14Q14449 540 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 GPR68Q15743 365 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 PLEKHG6Q3KR16 790 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 DUSP28Q4G0W2 176 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 NDUFAF5Q5TEU4 345 aa8.58□□□□□ -1.04
VAPB-201ENST00000265619 CEP68Q76N32 757 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms