RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 ADARB2Q9NS39 739 aaKnown RBP16.77■□□□□ 0.28
SRF-201ENST00000265354 POLR3BQ9NW08 1133 aaPredicted RBP16.77■□□□□ 0.28
SRF-201ENST00000265354 ERVK13-1Q9NX77 482 aa16.77■□□□□ 0.28
SRF-201ENST00000265354 ASCC3Q8N3C0 2202 aaKnown RBP16.77■□□□□ 0.27
SRF-201ENST00000265354 FAM220BPB1ANY3 271 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 LOC730098B7Z3J9 87 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 SLC28A1O00337 649 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 UBFD1O14562 309 aaKnown RBP16.77■□□□□ 0.27
SRF-201ENST00000265354 MTX2O75431 263 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 OR1E2P47887 323 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 ATN1P54259 1190 aaPredicted RBP16.77■□□□□ 0.27
SRF-201ENST00000265354 ELP6Q0PNE2 266 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 TIMM50Q3ZCQ8 353 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 USP39Q53GS9 565 aaKnown RBP16.77■□□□□ 0.27
SRF-201ENST00000265354 TBPL2Q6SJ96 375 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 PIH1D2Q8WWB5 315 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 GKN1Q9NS71 199 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 ARMC1Q9NVT9 282 aa16.77■□□□□ 0.27
SRF-201ENST00000265354 PAK1IP1Q9NWT1 392 aaPredicted RBP16.77■□□□□ 0.27
SRF-201ENST00000265354 FCF1Q9Y324 198 aaKnown RBP16.77■□□□□ 0.27
SRF-201ENST00000265354 SLC1A7O00341 560 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 GBAP04062 536 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 LEPRP48357 1165 aaKnown RBP16.76■□□□□ 0.27
SRF-201ENST00000265354 ZNF284Q2VY69 593 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 PLET1Q6UQ28 207 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
SRF-201ENST00000265354 RAB43Q86YS6 212 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 FAM217AQ8IXS0 508 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 RNFT2Q96EX2 444 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 MUC13Q9H3R2 512 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 C11orf16Q9NQ32 467 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 CD84Q9UIB8 345 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 ARPC4-TTLL3A0A0A6YYG9 625 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 TRBC1P01850 177 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 Q6ZNX1 250 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 UBE2R2Q712K3 238 aaPredicted RBP16.76■□□□□ 0.27
SRF-201ENST00000265354 CLEC14AQ86T13 490 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 OR8H1Q8NGG4 311 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 SH3YL1Q96HL8 342 aaPredicted RBP16.76■□□□□ 0.27
SRF-201ENST00000265354 ZSCAN5AQ9BUG6 496 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 ZNF624Q9P2J8 865 aaPredicted RBP16.76■□□□□ 0.27
SRF-201ENST00000265354 NOS1APO75052 506 aaPredicted RBP16.76■□□□□ 0.27
SRF-201ENST00000265354 NNMTP40261 264 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 APOFQ13790 326 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 LCN8Q6JVE9 175 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 MBOAT1Q6ZNC8 495 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 PLEKHM3Q6ZWE6 761 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 VTCN1Q7Z7D3 282 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 SERPINA9Q86WD7 417 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 TMEM125Q96AQ2 219 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 SLCO4A1Q96BD0 722 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 TEX37Q96LM6 180 aa16.76■□□□□ 0.27
SRF-201ENST00000265354 DPH2Q9BQC3 489 aaPredicted RBP16.76■□□□□ 0.27
SRF-201ENST00000265354 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 GHRHRQ02643 423 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 FAM214AQ32MH5 1076 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 ZNF648Q5T619 568 aaPredicted RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 CCBE1Q6UXH8 406 aaPredicted RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 RANBP10Q6VN20 620 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 DEF8Q6ZN54 512 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 KIAA1191Q96A73 305 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 YTHDF1Q9BYJ9 559 aaKnown RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 DUS2Q9NX74 493 aaKnown RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 PADI3Q9ULW8 664 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 TRPV2Q9Y5S1 764 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 ZFP37Q9Y6Q3 630 aaPredicted RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 COL18A1P39060 1754 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 SMIM35A0A1B0GVV1 85 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 SAP18O00422 153 aaKnown RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 ZW10O43264 779 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 CPNE3O75131 537 aaKnown RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 ALDH2P05091 517 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 RCVRNP35243 200 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 HCAR3P49019 387 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 STC1P52823 247 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 SLC9A5Q14940 896 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 CYBRD1Q53TN4 286 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 OR2T5Q6IEZ7 315 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 MSANTD2Q6P1R3 559 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 TMPRSS11AQ6ZMR5 421 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 OR2T29Q8NH02 315 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 NELL1Q92832 810 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 BARD1Q99728 777 aaKnown RBP16.75■□□□□ 0.27
SRF-201ENST00000265354 TTYH2Q9BSA4 534 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 TNKS2Q9H2K2 1166 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 CLN6Q9NWW5 311 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 VAPAQ9P0L0 249 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 LYVE1Q9Y5Y7 322 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 PRR23AA6NEV1 266 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 UNCXA6NJT0 531 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 SCNN1AP37088 669 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 PLD1Q13393 1074 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 SELPLGQ14242 412 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 ABRAXAS2Q15018 415 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 SVOPLQ8N434 492 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 COPS8Q99627 209 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 RHCGQ9UBD6 479 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 CPQQ9Y646 472 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 FAM240BA0A1B0GVZ2 78 aa16.75■□□□□ 0.27
SRF-201ENST00000265354 I3L521 148 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms