RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 C2CD4AQ8NCU7 369 aaPredicted RBP14.79□□□□□ -0.04
CASC3-201ENST00000264645 RPL3LQ92901 407 aaKnown RBP14.79□□□□□ -0.04
CASC3-201ENST00000264645 CAMKK2Q96RR4 588 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 ASPNQ9BXN1 380 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 FBXO44Q9H4M3 255 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 VRTNQ9H8Y1 702 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 PRDM5Q9NQX1 630 aaPredicted RBP14.79□□□□□ -0.04
CASC3-201ENST00000264645 SPIN1Q9Y657 262 aaPredicted RBP14.79□□□□□ -0.04
CASC3-201ENST00000264645 CICQ96RK0 1608 aaPredicted RBP14.79□□□□□ -0.04
CASC3-201ENST00000264645 E9PAM4 449 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 PLD2O14939 933 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 KLHL18O94889 574 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 DNTTP04053 509 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 BMP4P12644 408 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 HTR1BP28222 390 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 PRKAG1P54619 331 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 CYBRD1Q53TN4 286 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 PAGE3Q5JUK9 113 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 CPTPQ5TA50 214 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 ZNF675Q8TD23 568 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 TMEM138Q9NPI0 162 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 SMPD4Q9NXE4 827 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 PFDN2Q9UHV9 154 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 AKAP11Q9UKA4 1901 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 KERAO60938 352 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 GADD45AP24522 165 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 DNAJB1P25685 340 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 SHMT2P34897 504 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 IDUAP35475 653 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 ST3GAL4Q11206 333 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 XKR6Q5GH73 641 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 FAM117BQ6P1L5 589 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 SYVN1Q86TM6 617 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 CACNG4Q9UBN1 327 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 ZNF451Q9Y4E5 1061 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 TIAM2Q8IVF5 1701 aa14.79□□□□□ -0.04
CASC3-201ENST00000264645 MAGEB17A8MXT2 336 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 SLC25A14O95258 325 aaPredicted RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 NDST3O95803 873 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 VIPP01282 170 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 ATF6P18850 670 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 LEPRP48357 1165 aaKnown RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 GABARAPL2P60520 117 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 EMX1Q04741 257 aaPredicted RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 ARMC12Q5T9G4 340 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 TRIM40Q6P9F5 258 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 TRPV1Q8NER1 839 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 OR6Q1Q8NGQ2 317 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 NEURL2Q9BR09 285 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 ANGPT4Q9Y264 503 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 DYRK1BQ9Y463 629 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 MICAL3Q7RTP6 2002 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 ANKRD34BA5PLL1 514 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 CLIC1O00299 241 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 KCNA5P22460 613 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 ATN1P54259 1190 aaPredicted RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 RPP38P78345 283 aaKnown RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 VEPH1Q14D04 833 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 CTXN3Q4LDR2 81 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 CILP2Q8IUL8 1156 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 DTWD1Q8N5C7 304 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 MEIOBQ8N635 442 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 RTL3Q8N8U3 475 aaKnown RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 CHIAQ9BZP6 476 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 KLHL31Q9H511 634 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 UGT2A1Q9Y4X1 527 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 TSPAN1O60635 241 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 LILRA4P59901 499 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 SLC10A7Q0GE19 358 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 GANABQ14697 944 aaKnown RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 HSF5Q4G112 596 aaPredicted RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 RETREG3Q86VR2 466 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 LGI4Q8N135 537 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 GPRC5AQ8NFJ5 357 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 RHOXF1Q8NHV9 184 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 HMCESQ96FZ2 354 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 PCED1BQ96HM7 432 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 ZBTB20Q9HC78 741 aaPredicted RBP14.78□□□□□ -0.04
CASC3-201ENST00000264645 PCDHGC4Q9Y5F7 938 aa14.78□□□□□ -0.04
CASC3-201ENST00000264645 A0A1W2PQ67 120 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 KIAA0513O60268 411 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 HPRP00739 348 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 CLDN10P78369 228 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 RPL6Q02878 288 aaKnown RBP14.77□□□□□ -0.04
CASC3-201ENST00000264645 CDK5R2Q13319 367 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 USP45Q70EL2 814 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 SPATC1Q76KD6 591 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 ZNF431Q8TF32 576 aaPredicted RBP14.77□□□□□ -0.04
CASC3-201ENST00000264645 WACQ9BTA9 647 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 NLNQ9BYT8 704 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 NFKBIL1Q9UBC1 381 aaPredicted RBP14.77□□□□□ -0.04
CASC3-201ENST00000264645 PTCH2Q9Y6C5 1203 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 N4BP2Q86UW6 1770 aaPredicted RBP14.77□□□□□ -0.04
CASC3-201ENST00000264645 ARHGEF33A8MVX0 844 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 CLDN9O95484 217 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 STSP08842 583 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 NOS3P29474 1203 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 AGAP6Q5VW22 663 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 HMBOX1Q6NT76 420 aa14.77□□□□□ -0.04
CASC3-201ENST00000264645 ZNF534Q76KX8 674 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms