RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 GP2P55259 537 aaKnown RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 CDH4P55283 916 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 CHRNA6Q15825 494 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 MOGQ16653 247 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 RGS21Q2M5E4 152 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 CACHD1Q5VU97 1274 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 LAIR1Q6GTX8 287 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 OR4F3Q6IEY1 312 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 FUT10Q6P4F1 479 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 EFL1Q7Z2Z2 1120 aaKnown RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 APCDD1Q8J025 514 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 DBF4BQ8NFT6 615 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 SELENOMQ8WWX9 145 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 AUTS2Q8WXX7 1259 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 OSBPL10Q9BXB5 764 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 HEBP1Q9NRV9 189 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 IL17CQ9P0M4 197 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 FNIP2Q9P278 1114 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 DNAJB9Q9UBS3 223 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 PTPRDP23468 1912 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 FAM92AA1XBS5 289 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 A8MU76 341 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 BCKDKO14874 412 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 RGS14O43566 566 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 KLK8O60259 260 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ESR1P03372 595 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 INHBBP09529 407 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 CSKP41240 450 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 EMX1Q04741 257 aaPredicted RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 BOP1Q14137 746 aaKnown RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 SYT16Q17RD7 645 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ANGPTL8Q6UXH0 198 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 LRRC8DQ7L1W4 858 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 CYP4Z1Q86W10 505 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 EID3Q8N140 333 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ARL10Q8N8L6 244 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 RHBDF1Q96CC6 855 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 HERC2P3Q9BVR0 1158 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 FAM126AQ9BYI3 521 aaPredicted RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 IL26Q9NPH9 171 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 INIPQ9NRY2 104 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 NUDT4Q9NZJ9 180 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ZNF639Q9UID6 485 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.92□□□□□ -0.98
MSH4-201ENST00000263187 CLEC4EQ9ULY5 219 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 PIKFYVEQ9Y2I7 2098 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 TRIM64A6NGJ6 449 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 TBKBP1A7MCY6 615 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 H0YAE9 185 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 M0R3G1 203 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 SEPT4O43236 478 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ADAM23O75077 832 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 TULP3O75386 442 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 NADKO95544 446 aaPredicted RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 ANGPTL1O95841 491 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 TNFRSF1BP20333 461 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 CDH18Q13634 790 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 HECTD3Q5T447 861 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 TTC23Q5W5X9 447 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 CXorf57Q6NSI4 855 aaKnown RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 ZNF621Q6ZSS3 439 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ZNF551Q7Z340 670 aaPredicted RBP8.92□□□□□ -0.98
MSH4-201ENST00000263187 ADAMTSL2Q86TH1 951 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 DPP10Q8N608 796 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 TAMM41Q96BW9 452 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 DOK1Q99704 481 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ACPTQ9BZG2 426 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ZFYVE1Q9HBF4 777 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ITM2CQ9NQX7 267 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 MARCH5Q9NX47 278 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 FNDC1Q4ZHG4 1894 aaPredicted RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 RANBP2P49792 3224 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 ZNF840PA6NDX5 716 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 M0R129 80 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 NDUFS2O75306 463 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 CLDN11O75508 207 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 SEC24AO95486 1093 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 CPNE6O95741 557 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ABCB1P08183 1280 aaPredicted RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 COL6A1P12109 1028 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 EPB42P16452 691 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 CDH3P22223 829 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 IGFBP5P24593 272 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 S100A3P33764 101 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 EIF2B2P49770 351 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 BCAP31P51572 246 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 SMAD3P84022 425 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 PPP2R2BQ00005 443 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 CACNG1Q06432 222 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 GPR17Q13304 367 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 KIAA0040Q15053 153 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 NPTX1Q15818 432 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 POM121L1PQ3SYA9 428 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 ZNF648Q5T619 568 aaPredicted RBP8.91□□□□□ -0.98
MSH4-201ENST00000263187 GTF2IRD2BQ6EKJ0 949 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 KIAA1841Q6NSI8 718 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 RGMBQ6NW40 437 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 SLC16A12Q6ZSM3 486 aa8.91□□□□□ -0.98
MSH4-201ENST00000263187 GTF2IRD2Q86UP8 949 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms