RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 TMEM164Q5U3C3 297 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 XKRXQ6PP77 449 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 TUBA1AQ71U36 451 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 GLIS3Q8NEA6 775 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 BSNDQ8WZ55 320 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 GAL3ST4Q96RP7 486 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 IL12RB2Q99665 862 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 PLEKHA6Q9Y2H5 1048 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 TM7SF2O76062 418 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 ADRB2P07550 413 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 FNTBP49356 437 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 SP2Q02086 613 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 MAPK14Q16539 360 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 HECTD2Q5U5R9 776 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 KCTD9Q7L273 389 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TMEM192Q8IY95 271 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 POGLUT1Q8NBL1 392 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 RPS2P15880 293 aaKnown RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 ZNF14P17017 642 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 CPN2P22792 545 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 RASGEF1BQ0VAM2 473 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 GANABQ14697 944 aaKnown RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 SLC9B1Q4ZJI4 515 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 ALG10Q5BKT4 473 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 HFE2Q6ZVN8 426 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 PAQR7Q86WK9 346 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 DNAJC28Q9NX36 388 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 UGT2B4P06133 528 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 IL12BP29460 328 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 GRM5P41594 1212 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 IL23RQ5VWK5 629 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 MTFR2Q6P444 385 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 SLC37A3Q8NCC5 494 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 PCDHA2Q9Y5H9 948 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 ABLIM1O14639 778 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 GADD45GO95257 159 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TSHRP16473 764 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TIGD6Q17RP2 521 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 RBM20Q5T481 1227 aaKnown RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 KIAA1161Q6NSJ0 714 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 P4HA3Q7Z4N8 544 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TMCO2Q7Z6W1 182 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 SYVN1Q86TM6 617 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 C12orf65Q9H3J6 166 aaKnown RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 CTPS2Q9NRF8 586 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 CA14Q9ULX7 337 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 FARSAQ9Y285 508 aaKnown RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TVP23AA6NH52 213 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 GABBR2O75899 941 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 YES1P07947 543 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 SLC10A7Q0GE19 358 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 CBLBQ13191 982 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TMEM214Q6NUQ4 689 aaKnown RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 FBXO46Q6PJ61 603 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 PAOXQ6QHF9 649 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 FAM43BQ6ZT52 329 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 FAM156AQ8NDB6 213 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 LNX1Q8TBB1 728 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-202ENST00000262676 C8orf48Q96LL4 319 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TTYH2Q9BSA4 534 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 GSKIPQ9P0R6 139 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 CPQQ9Y646 472 aa12.63□□□□□ -0.39
TTC39A-202ENST00000262676 TGDSO95455 350 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 RFTN2Q52LD8 501 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 ABHD15Q6UXT9 468 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 TMED4Q7Z7H5 227 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 RANBP3LQ86VV4 465 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 TMEM17Q86X19 198 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 OR10A6Q8NH74 314 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 PRDM16Q9HAZ2 1276 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 SPATA6Q9NWH7 488 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 KIAA1522Q9P206 1035 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 COL20A1Q9P218 1284 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 MKLN1Q9UL63 735 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 ERVK-11Q9UQG0 969 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 ISPDA4D126 451 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 A8MV72 311 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 MYCLP1P12525 358 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 MAGEA11P43364 429 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 MLLT1Q03111 559 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 VITQ6UXI7 678 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 C1orf186Q6ZWK4 172 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 PHYKPLQ8IUZ5 450 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 PRSS58Q8IYP2 241 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 SLC35C1Q96A29 364 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 COPS8Q99627 209 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 UBR1Q8IWV7 1749 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 hCG_1818297A0A087WSY0 165 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 PLGP00747 810 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-202ENST00000262676 HK1P19367 917 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 CASRP41180 1078 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 GRK6P43250 576 aa12.62□□□□□ -0.39
TTC39A-202ENST00000262676 TARDBPQ13148 414 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms