RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SREBF2Q12772 1141 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 SLC14A1Q13336 389 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 TTC23Q5W5X9 447 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 KIAA1841Q6NSI8 718 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 MICU2Q8IYU8 434 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 SLC15A4Q8N697 577 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 ZNF555Q8NEP9 628 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 ALG14Q96F25 216 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 DCAF13Q9NV06 445 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 VNN3Q9NY84 501 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 XPNPEP2O43895 674 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 STK16O75716 305 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 MSH3P20585 1137 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 RPS3P23396 243 aaKnown RBP eCLIP15.98■□□□□ 0.152e-7■■■□□ 17.1
TM9SF1-201ENST00000261789 BCL2L1Q07817 233 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 PGS1Q32NB8 556 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 GTF2IRD2BQ6EKJ0 949 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 GTF2IRD2Q86UP8 949 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 NPAS4Q8IUM7 802 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 ARL14EPQ8N8R7 260 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 GPR26Q8NDV2 337 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 CNIH3Q8TBE1 160 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 LZICQ8WZA0 190 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 CCDC90BQ9GZT6 254 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 ELAC1Q9H777 363 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 SERHLQ9NQF3 203 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 TBC1D23Q9NUY8 699 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 FAIMQ9NVQ4 179 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 C1orf109Q9NX04 203 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 MTRRQ9UBK8 725 aa15.98■□□□□ 0.15
TM9SF1-201ENST00000261789 LOC100130705A0A1B0GUX0 176 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 BOLA2-SMG1P6H3BVE0 249 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 INMTO95050 263 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 BCL10O95999 233 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 JUNBP17275 347 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 TMBIM6P55061 237 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 IL1RL1Q01638 556 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 SKIV2LQ15477 1246 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 CDKN3Q16667 212 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 LRRC73Q5JTD7 316 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 RBM48Q5RL73 367 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 TXNDC8Q6A555 127 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 CES5AQ6NT32 575 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 GALNT18Q6P9A2 607 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 C16orf87Q6PH81 154 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 ZNF551Q7Z340 670 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 AADATQ8N5Z0 425 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 ADAMTS19Q8TE59 1207 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 SKA2Q8WVK7 121 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 BORCS5Q969J3 196 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 CCDC138Q96M89 665 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 NTMT1Q9BV86 223 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 PARVBQ9HBI1 364 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 ARL15Q9NXU5 204 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 GPRC5BQ9NZH0 403 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 ANAPC1Q9H1A4 1944 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 TRBV5-3A0A0A0MS03 114 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 NPIPB15A6NHN6 443 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 DIRAS1O95057 198 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 HPRP00739 348 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 EBLN1P0CF75 366 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 CYP4B1P13584 511 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 RPIAP49247 311 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 ALDH7A1P49419 539 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 MAD2L1Q13257 205 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 AQP6Q13520 282 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 SPCS2Q15005 226 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 GPR149Q86SP6 731 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 TMEM150AQ86TG1 271 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 PARP8Q8N3A8 854 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 TERB1Q8NA31 727 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 HDAC2Q92769 488 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 USP7Q93009 1102 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 FAM120BQ96EK7 910 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 SCLYQ96I15 445 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 RBM4BQ9BQ04 359 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 BEGAINQ9BUH8 593 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 RBM4Q9BWF3 364 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 FUNDC2Q9BWH2 189 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 TMEFF2Q9UIK5 374 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 DOLKQ9UPQ8 538 aa15.97■□□□□ 0.15
TM9SF1-201ENST00000261789 COL6A1P12109 1028 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 GSTM2P28161 218 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 HTR1BP28222 390 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 ISL1P61371 349 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 RPS14P62263 151 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 ATP1A4Q13733 1029 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 PIWIL3Q7Z3Z3 882 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 ZNF554Q86TJ5 538 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 GLB1L3Q8NCI6 653 aaPredicted RBP15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 PJA1Q8NG27 643 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 SELENOMQ8WWX9 145 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 TMEM9Q9P0T7 183 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 PPT2Q9UMR5 302 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 YIPF1Q9Y548 306 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 SCELO95171 688 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 PARNO95453 639 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 CLDN9O95484 217 aa15.96■□□□□ 0.15
TM9SF1-201ENST00000261789 TPGS1Q6ZTW0 290 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms