RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 VRTNQ9H8Y1 702 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 CD320Q9NPF0 282 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 ADPRHL2Q9NX46 363 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 ABT1Q9ULW3 272 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 SLC22A14Q9Y267 594 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 ANKDD1BA6NHY2 528 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 MUSKO15146 869 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 CPNE3O75131 537 aaKnown RBP9.9□□□□□ -0.83
PALB2-201ENST00000261584 STK16O75716 305 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 CYP11A1P05108 521 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 TACR2P21452 398 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 STC1P52823 247 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 CDC42EP1Q00587 391 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 ATP6AP1Q15904 470 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 ZSWIM7Q19AV6 140 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 NIPAL1Q6NVV3 410 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 CCDC80Q76M96 950 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 KLHDC9Q8NEP7 349 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 ENKURQ8TC29 256 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 C1GALT1C1Q96EU7 318 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 ZNF419Q96HQ0 510 aaPredicted RBP9.9□□□□□ -0.83
PALB2-201ENST00000261584 PKP4Q99569 1192 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 PAK1IP1Q9NWT1 392 aaPredicted RBP9.9□□□□□ -0.83
PALB2-201ENST00000261584 LYVE1Q9Y5Y7 322 aa9.9□□□□□ -0.83
PALB2-201ENST00000261584 ZNF197O14709 1029 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 OR10H3O60404 316 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 KERAO60938 352 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 VPS4BO75351 444 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 CLDN7O95471 211 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 STSP08842 583 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 EPHA2P29317 976 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 LEPRP48357 1165 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 SMAD3P84022 425 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 MEF2AQ02078 507 aaPredicted RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 MRPL28Q13084 256 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 HKDC1Q2TB90 917 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 TPRG1LQ5T0D9 272 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 IER5LQ5T953 404 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 FAM131AQ6UXB0 335 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 UBE2R2Q712K3 238 aaPredicted RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 CYS1Q717R9 158 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 CYP4Z1Q86W10 505 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 LSRQ86X29 649 aaPredicted RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 RGL4Q8IZJ4 473 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 BEND7Q8N7W2 519 aaPredicted RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 SH3YL1Q96HL8 342 aaPredicted RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 YME1L1Q96TA2 773 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 MFSD1Q9H3U5 465 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 BEX1Q9HBH7 125 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 KLHL1Q9NR64 748 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 GDAP2Q9NXN4 497 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 NKIRAS2Q9NYR9 191 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 ANXA5P08758 320 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 ENGP17813 658 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 EDNRBP24530 442 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 OR1D2P34982 312 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 GPC1P35052 558 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 ATP5C1P36542 298 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 BCL2L1Q07817 233 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 TTLL9Q3SXZ7 439 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 INTS11Q5TA45 600 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 PTCHD4Q6ZW05 846 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 CLECL1Q8IZS7 167 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 ZNF614Q8N883 585 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 PHF10Q8WUB8 498 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 FUBP1Q96AE4 644 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 SLC2A13Q96QE2 648 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 RBM38Q9H0Z9 239 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 FBXO44Q9H4M3 255 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 GNPTGQ9UJJ9 305 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 ACSL6Q9UKU0 697 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 ERGIC3Q9Y282 383 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 WBP11Q9Y2W2 641 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 PCDHGA11Q9Y5H2 935 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 GMEB1Q9Y692 573 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 OAS3Q9Y6K5 1087 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 PCP4L1A6NKN8 68 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 SUV39H1O43463 412 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 TRBC1P01850 177 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 RHOQP17081 205 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 CORO1AP31146 461 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 SLC26A3P40879 764 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 RPS14P62263 151 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 NAE1Q13564 534 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 NFE2L1Q14494 772 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 NFE2Q16621 373 aaPredicted RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 BRMS1LQ5PSV4 323 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 KCTD11Q693B1 232 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 EIF3MQ7L2H7 374 aaKnown RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 TCAIMQ8N3R3 496 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 FAM83FQ8NEG4 500 aaPredicted RBP9.89□□□□□ -0.83
PALB2-201ENST00000261584 ADAMTS10Q9H324 1103 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 MIEF1Q9NQG6 463 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 AASDHPPTQ9NRN7 309 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 GPR83Q9NYM4 423 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 PCDHGA3Q9Y5H0 932 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 TRPV2Q9Y5S1 764 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 CPQQ9Y646 472 aa9.89□□□□□ -0.83
PALB2-201ENST00000261584 BRWD1Q9NSI6 2320 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms