RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GALNTL6Q49A17 601 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 PLEKHS1Q5SXH7 462 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 ZNF549Q6P9A3 640 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 UNQ6494/PRO21346Q6UXR6 183 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 TBC1D1Q86TI0 1168 aaPredicted RBP16.31■□□□□ 0.2
SDCBP-201ENST00000260130 PLXDC1Q8IUK5 500 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 GPATCH11Q8N954 259 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 ACVR1CQ8NER5 493 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 JPH3Q8WXH2 748 aaPredicted RBP16.31■□□□□ 0.2
SDCBP-201ENST00000260130 FAM136AQ96C01 138 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 PDP2Q9P2J9 529 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 BAIAP2L1Q9UHR4 511 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 COMMD10Q9Y6G5 202 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 CCDC187A0A096LP49 1063 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 C1QTNF9BB2RNN3 333 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 AHSGP02765 367 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 C1QTNF9P0C862 333 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 GABRB3P28472 473 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 KLHL35Q6PF15 583 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 GALNT7Q86SF2 657 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 RSC1A1Q92681 617 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 NXPE2Q96DL1 559 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 GALPQ9UBC7 116 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 FREM2Q5SZK8 3169 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 THRAP10827 490 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 NQO1P15559 274 aaKnown RBP16.3■□□□□ 0.2
SDCBP-201ENST00000260130 CAPZBP47756 277 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 NCALDP61601 193 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 MGAT5Q09328 741 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 EIF3IQ13347 325 aaKnown RBP16.3■□□□□ 0.2
SDCBP-201ENST00000260130 TRA2AQ13595 282 aaKnown RBP eCLIP16.3■□□□□ 0.2
SDCBP-201ENST00000260130 C3orf38Q5JPI3 329 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 TBC1D21Q8IYX1 336 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 OR5AR1Q8NGP9 310 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 WDR36Q8NI36 951 aaKnown RBP16.3■□□□□ 0.2
SDCBP-201ENST00000260130 KCNJ9Q92806 393 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 CCDC74BQ96LY2 380 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 POLR1BQ9H9Y6 1135 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 ZFATQ9P243 1243 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 SLC17A6Q9P2U8 582 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 SATB2Q9UPW6 733 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 AK5Q9Y6K8 562 aa16.3■□□□□ 0.2
SDCBP-201ENST00000260130 CHD8Q9HCK8 2581 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 A0A1W2PNU3 283 aaPredicted RBP16.29■□□□□ 0.2
SDCBP-201ENST00000260130 MPOP05164 745 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 SSTR1P30872 391 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 MAGEA4P43358 317 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 LSSP48449 732 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 CLCN7P51798 805 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 ABRQ12979 859 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 BNIP1Q12981 228 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 PRKG2Q13237 762 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 CAPN12Q6ZSI9 719 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 RAB11FIP2Q7L804 512 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 ZBTB2Q8N680 514 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 RCBTB1Q8NDN9 531 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 OR5K2Q8NHB8 316 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 RAB33BQ9H082 229 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 TRIT1Q9H3H1 467 aaKnown RBP16.29■□□□□ 0.2
SDCBP-201ENST00000260130 CXorf56Q9H5V9 222 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 MED16Q9Y2X0 877 aa16.29■□□□□ 0.2
SDCBP-201ENST00000260130 GABREP78334 506 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 CYP4F3Q08477 520 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 SNAP47Q5SQN1 464 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 C3orf62Q6ZUJ4 267 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 SRRM1Q8IYB3 904 aaKnown RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 OR4E2Q8NGC2 313 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 OR52E1Q8NGJ3 308 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 LCN9Q8WX39 176 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 C9orf72Q96LT7 481 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 CMKLR1Q99788 373 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 AARSD1Q9BTE6 412 aaKnown RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 HGH1Q9BTY7 390 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 TFB2MQ9H5Q4 396 aaKnown RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 HRASLS2Q9NWW9 162 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 AKAP7Q9P0M2 348 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 KLHL14Q9P2G3 628 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 KLHL42Q9P2K6 505 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 EPHA6Q9UF33 1036 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 TBK1Q9UHD2 729 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 POLG2Q9UHN1 485 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 PCDHGA8Q9Y5G5 932 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 MN1Q10571 1320 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 HGSO14964 777 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 CAPN5O15484 640 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 C9P02748 559 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 GSTA2P09210 222 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 GFERP55789 205 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 GBX1Q14549 363 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 C16orf72Q14CZ0 275 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 CYS1Q717R9 158 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 CYP4X1Q8N118 509 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 FBXO39Q8N4B4 442 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 CFAP61Q8NHU2 1237 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 ZDHHC12Q96GR4 267 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 TGM7Q96PF1 710 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 SRMSQ9H3Y6 488 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 CCDC86Q9H6F5 360 aaKnown RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 MLXIPLQ9NP71 852 aa16.28■□□□□ 0.2
SDCBP-201ENST00000260130 KLHL3Q9UH77 587 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms