RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CRIPAKQ8N1N5 446 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 NCLNQ969V3 563 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 C19orf43Q9BQ61 176 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 HTATIP2Q9BUP3 242 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 MRPL9Q9BYD2 267 aaKnown RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 MAGIXQ9H6Y5 334 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 STARD7Q9NQZ5 370 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 C3orf18Q9UK00 162 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 ZNF106Q9H2Y7 1883 aaKnown RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 FAM220BPB1ANY3 271 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 HS6ST1O60243 411 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 SERPINA1P01009 418 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 HNRNPCP07910 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX56-201ENST00000258772 AGXTP21549 392 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 GKP32189 559 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 ISL1P61371 349 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 SMAD3P84022 425 aaKnown RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 CDH18Q13634 790 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 CPSF6Q16630 551 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX56-201ENST00000258772 ADGRG2Q8IZP9 1017 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 APCDD1Q8J025 514 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 EID3Q8N140 333 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 C10orf111Q8N326 155 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 ZCCHC7Q8N3Z6 543 aaKnown RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 PAF1Q8N7H5 531 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 DCAF4L2Q8NA75 395 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 HJURPQ8NCD3 748 aaPredicted RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 DNAJB8Q8NHS0 232 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 FRS2Q8WU20 508 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 FAM120BQ96EK7 910 aaKnown RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 CLSTN3Q9BQT9 956 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 SLC29A3Q9BZD2 475 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 ACPTQ9BZG2 426 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 KCNH6Q9H252 994 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 SERHLQ9NQF3 203 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 BLOC1S6Q9UL45 172 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 BACE2Q9Y5Z0 518 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 HTTP42858 3142 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 ARVCFO00192 962 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 CLDN9O95484 217 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 KRT6AP02538 564 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 KRT6BP04259 564 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 KRT6CP48668 564 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 CLDN8P56748 225 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 RPS14P62263 151 aaKnown RBP14.88□□□□□ -0.03
DDX56-201ENST00000258772 PIGFQ07326 219 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 BFSP2Q13515 415 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 TCTN1Q2MV58 587 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 GPR33Q49SQ1 333 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 LRIF1Q5T3J3 769 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 DDHD1Q8NEL9 900 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 ZNF461Q8TAF7 563 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 BHMTQ93088 406 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 CPPED1Q9BRF8 314 aaPredicted RBP14.88□□□□□ -0.03
DDX56-201ENST00000258772 TNKS2Q9H2K2 1166 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 MAN2B2Q9Y2E5 1009 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 DLGAP4Q9Y2H0 992 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 A0A096LPI6 279 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.88□□□□□ -0.03
DDX56-201ENST00000258772 A8MX80 341 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 HOXA2O43364 376 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 E2F6O75461 281 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 ARHGEF15O94989 841 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 PDYNP01213 254 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 ANXA5P08758 320 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 IL1RNP18510 177 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 VAC14Q08AM6 782 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 TOP3AQ13472 1001 aaPredicted RBP14.88□□□□□ -0.03
DDX56-201ENST00000258772 DCP2Q8IU60 420 aaKnown RBP14.88□□□□□ -0.03
DDX56-201ENST00000258772 NXPE1Q8N323 547 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 FKBP10Q96AY3 582 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 CCDC138Q96M89 665 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 SLC22A12Q96S37 553 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 PARVBQ9HBI1 364 aa14.88□□□□□ -0.03
DDX56-201ENST00000258772 ABLIM3O94929 683 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 ZBTB11O95625 1053 aaPredicted RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 EFEMP2O95967 443 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 GSNP06396 782 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 ZNF12P17014 697 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 EPORP19235 508 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 S100A3P33764 101 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 SPAM1P38567 509 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 RPIAP49247 311 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 RAB15P59190 212 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 DPY19L1Q2PZI1 675 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 TTLL9Q3SXZ7 439 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 ZNF691Q5VV52 312 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 GRAMD4Q6IC98 578 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 RETSATQ6NUM9 610 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 DET1Q7L5Y6 550 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 ZBTB46Q86UZ6 589 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 CBARPQ8N350 705 aaPredicted RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 TMEM132CQ8N3T6 1108 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 ARL10Q8N8L6 244 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 TRMT2BQ96GJ1 504 aaKnown RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 PYURFQ96I23 114 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 TSEN34Q9BSV6 310 aaKnown RBP14.87□□□□□ -0.03
DDX56-201ENST00000258772 BEGAINQ9BUH8 593 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 VN1R3Q9BXE9 311 aa14.87□□□□□ -0.03
DDX56-201ENST00000258772 SLC32A1Q9H598 525 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms