RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 CRHR1P34998 444 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 NKX3-2P78367 333 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 CREB5Q02930 508 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 TRAM2Q15035 370 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SMTNL2Q2TAL5 461 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PIK3R6Q5UE93 754 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ZNF57Q68EA5 555 aaPredicted RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 FAM45BPQ6NSW5 357 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 LINC00299Q6ZSB3 139 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DENND6AQ8IWF6 608 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 NLGN4XQ8N0W4 816 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ZFP82Q8N141 532 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 LCORLQ8N3X6 602 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 C12orf45Q8N5I9 185 aaPredicted RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 GDPD1Q8N9F7 314 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PNMA1Q8ND90 353 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 BPIFB1Q8TDL5 484 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 HEXDCQ8WVB3 486 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 MARVELD3Q96A59 401 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DHRS4Q9BTZ2 278 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PIGUQ9H490 435 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 MCUBQ9NWR8 336 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DUX4Q9UBX2 424 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PPIEQ9UNP9 301 aaKnown RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 MYO5AQ9Y4I1 1855 aaKnown RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 CHD4Q14839 1912 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PRAMEF33A0A0G2JMD5 474 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 A0A1B0GV90 55 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ARHGEF33A8MVX0 844 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ZNF487B1APH4 448 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 NDUFS8O00217 210 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 TSPAN3O60637 253 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PRAMEF10O60809 474 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 IL18RAPO95256 599 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 RASAL1O95294 804 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 C4BPBP20851 252 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PSMC6P62333 389 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 GRAPQ13588 217 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 CCNJQ5T5M9 372 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 GPR158Q5T848 1215 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 YOD1Q5VVQ6 348 aaPredicted RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 SYVN1Q86TM6 617 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ZNF227Q86WZ6 799 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 RCOR2Q8IZ40 523 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SPPL3Q8TCT6 385 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 TMEM40Q8WWA1 233 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 BBS4Q96RK4 519 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 NPAS1Q99742 590 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 TXN2Q99757 166 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 LXNQ9BS40 222 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 CARS2Q9HA77 564 aaKnown RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 CREBZFQ9NS37 354 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SLC22A11Q9NSA0 550 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ZSCAN32Q9NX65 697 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 TINAGQ9UJW2 476 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 CLCA2Q9UQC9 943 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DLG5Q8TDM6 1919 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ZNF879B4DU55 563 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 F5H6K3 240 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PDXKO00764 312 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SNNO75324 88 aaPredicted RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 SLC22A3O75751 556 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ACAA1P09110 424 aaPredicted RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 NCF1P14598 390 aaPredicted RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 DARSP14868 501 aaKnown RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 PSMA2P25787 234 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 KLRC2P26717 231 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 FXR2P51116 673 aaKnown RBP eCLIP7.53□□□□□ -1.2
USP29-201ENST00000254181 RPS26P62854 115 aaKnown RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 GABPAQ06546 454 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 TNK2Q07912 1038 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 NFYCQ13952 458 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PKN3Q6P5Z2 889 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SPESP1Q6UW49 350 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 MFSD7Q6UXD7 560 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 HIPK1Q86Z02 1210 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 COQ8AQ8NI60 647 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ACTL9Q8TC94 416 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SHISA4Q96DD7 197 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 LINC00052Q96N35 136 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 KCNC2Q96PR1 638 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PNMA5Q96PV4 448 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 TTLL2Q9BWV7 592 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SPNS1Q9H2V7 528 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 RNF121Q9H920 327 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 UCK1Q9HA47 277 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 CDHR5Q9HBB8 845 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 LRRC4Q9HBW1 653 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 ABCB9Q9NP78 766 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 C14orf105Q9NVL8 296 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 HSPE1-MOB4S4R3N1 261 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 MROH5Q6ZUA9 1318 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 MAGEB6P1A0A0J9YX57 407 aa7.52□□□□□ -1.21
USP29-201ENST00000254181 TPP1O14773 563 aa7.52□□□□□ -1.21
USP29-201ENST00000254181 RGS10O43665 173 aa7.52□□□□□ -1.21
USP29-201ENST00000254181 NOBOXO60393 691 aa7.52□□□□□ -1.21
USP29-201ENST00000254181 CST8O60676 142 aa7.52□□□□□ -1.21
USP29-201ENST00000254181 GABARAPO95166 117 aa7.52□□□□□ -1.21
USP29-201ENST00000254181 C1QBP02746 253 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms