RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 NFATC3Q12968 1075 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 THOC5Q13769 683 aaKnown RBP20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 ERV3-1Q14264 604 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 DEFB110Q30KQ9 67 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 ARMC3Q5W041 872 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 NEPROQ6NW34 567 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 CNSTQ6PJW8 725 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 CDHR3Q6ZTQ4 885 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 ZNF605Q86T29 641 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 CILP2Q8IUL8 1156 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 NAT8LQ8N9F0 302 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 LMNTD1Q8N9Z9 388 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 MR1Q95460 341 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 CLIP3Q96DZ5 547 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 BIRC8Q96P09 236 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 IL17FQ96PD4 163 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 RUFY1Q96T51 708 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 TCF12Q99081 682 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 AKIRIN1Q9H9L7 192 aaPredicted RBP20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 PYCARDQ9ULZ3 195 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 TLN1Q9Y490 2541 aaKnown RBP20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 MAGEB16A2A368 324 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 CTAGE9A4FU28 777 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 C21orf140B9A014 251 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 TERTO14746 1132 aaKnown RBP20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 ESR1P03372 595 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 PEBP1P30086 187 aaKnown RBP20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 BDKRB1P46663 353 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 GPS2Q13227 327 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 KYNUQ16719 465 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 PLEKHS1Q5SXH7 462 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 TTC23LQ6PF05 361 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 FLVCR1-AS1Q8TAF5 88 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 SLC7A5P2Q9GIP4 190 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 ACTL8Q9H568 366 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 SERTAD3Q9UJW9 196 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 SLC39A10Q9ULF5 831 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 NFS1Q9Y697 457 aa20.42■□□□□ 0.86
HCFC1R1-201ENST00000248089 CDC14CA4D256 554 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 E5RI56 91 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 H3BMM5 538 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 CHRM3P20309 590 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 MAGEA3P43357 314 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 ITGA1P56199 1179 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 RPS18P62269 152 aaKnown RBP20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 KIR2DS3Q14952 304 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 ZNF789Q5FWF6 425 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 RNASEH2BQ5TBB1 312 aaKnown RBP20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 CENPUQ71F23 418 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 FAM20CQ8IXL6 584 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 AGGF1Q8N302 714 aaeCLIP20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 LINC01555Q8NAE3 123 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 SLC38A9Q8NBW4 561 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 TCTN2Q96GX1 697 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 FOPNLQ96NB1 174 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 NAPGQ99747 312 aaPredicted RBP20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 TWSG1Q9GZX9 223 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 ACTR5Q9H9F9 607 aaPredicted RBP20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 FAM60AQ9NP50 221 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 C20orf96Q9NUD7 363 aaPredicted RBP20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 VPS9D1Q9Y2B5 631 aa20.41■□□□□ 0.86
HCFC1R1-201ENST00000248089 ZCWPW2A0A1B0GU75 182 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 FER1L5A0AVI2 2057 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 KRT87PA6NCN2 255 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 E7EQ34 232 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 RASGRF2O14827 1237 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 CREG1O75629 220 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 KLK3P07288 261 aaPredicted RBP20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 MSL3P1P0C860 447 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 SFTPCP11686 197 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 PKMP14618 531 aaKnown RBP20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 CD9P21926 228 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 RPS15P62841 145 aaKnown RBP20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 KCNAB2Q13303 367 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 CTBP1Q13363 440 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 PTK6Q13882 451 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 GRB7Q14451 532 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 ZIC1Q15915 447 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 LONRF1Q17RB8 773 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 SLC5A12Q1EHB4 618 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 DENND6AQ8IWF6 608 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 KLHL7Q8IXQ5 586 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 GPR135Q8IZ08 494 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 ZBTB2Q8N680 514 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 MENTQ9BUN1 341 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 CHST8Q9H2A9 424 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 FBXO6Q9NRD1 293 aaPredicted RBP20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 INTS10Q9NVR2 710 aaKnown RBP20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 IRAK4Q9NWZ3 460 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 GEMIN8Q9NWZ8 242 aaKnown RBP20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 PCDHGA6Q9Y5G7 932 aa20.4■□□□□ 0.86
HCFC1R1-201ENST00000248089 DNALI1O14645 258 aaPredicted RBP20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 USP1O94782 785 aa20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 FURINP09958 794 aa20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 SLC1A2P43004 574 aa20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 ADARP55265 1226 aaKnown RBP20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 CCSMST1Q4G0I0 132 aa20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 CRTC2Q53ET0 693 aaPredicted RBP20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 IZUMO3Q5VZ72 239 aa20.39■□□□□ 0.85
HCFC1R1-201ENST00000248089 TMEM135Q86UB9 458 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms