RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CDYLQ9Y232 598 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 TDRKHQ9Y2W6 561 aaKnown RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 VWA7Q9Y334 891 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 LOXL2Q9Y4K0 774 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 PIEZO2Q9H5I5 2752 aa10.96□□□□□ -0.66
SF3B6-201ENST00000233468 SCN8AQ9UQD0 1980 aa10.96□□□□□ -0.66
SF3B6-201ENST00000233468 TCRBV9S1A1TA0A576 114 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 OR6C74A6NCV1 312 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF839A8K0R7 811 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 C2orf74A8MZ97 194 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 CASC3O15234 703 aaKnown RBP10.95□□□□□ -0.66
SF3B6-201ENST00000233468 ZBTB14O43829 449 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 C9P02748 559 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 CATP04040 527 aaKnown RBP10.95□□□□□ -0.66
SF3B6-201ENST00000233468 MPOP05164 745 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 MPC1LP0DKB6 136 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 SSTR1P30872 391 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 CSF2RBP32927 897 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 HSD17B2P37059 387 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 PDX1P52945 283 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 CXADRP78310 365 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 PRKG2Q13237 762 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 TRADDQ15628 312 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 TBC1D25Q3MII6 688 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 C3orf38Q5JPI3 329 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 SNAP47Q5SQN1 464 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF549Q6P9A3 640 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 IGF2-ASQ6U949 168 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 CAPN12Q6ZSI9 719 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 PRSS42Q7Z5A4 293 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 B3GNT8Q7Z7M8 397 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 KMT5CQ86Y97 462 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 CTAGE3PQ8IX95 158 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 CNPY4Q8N129 248 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 EIF1ADQ8N9N8 165 aaKnown RBP10.95□□□□□ -0.66
SF3B6-201ENST00000233468 SIDT2Q8NBJ9 832 aaKnown RBP10.95□□□□□ -0.66
SF3B6-201ENST00000233468 OR5AR1Q8NGP9 310 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.95□□□□□ -0.66
SF3B6-201ENST00000233468 TSPAN17Q96FV3 270 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF578Q96N58 590 aaPredicted RBP10.95□□□□□ -0.66
SF3B6-201ENST00000233468 TGM7Q96PF1 710 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 GPR21Q99679 349 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 B3GNT4Q9C0J1 378 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 SEMA6CQ9H3T2 930 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 RHOJQ9H4E5 214 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 PLAC1Q9HBJ0 212 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 SATB2Q9UPW6 733 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 LRP4O75096 1905 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 BOD1L1Q8NFC6 3051 aa10.95□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF106Q9H2Y7 1883 aaKnown RBP10.94□□□□□ -0.66
SF3B6-201ENST00000233468 PRAMEF33A0A0G2JMD5 474 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 GSAPA4D1B5 854 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 TLCD2A6NGC4 264 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 FAM159BA6NKW6 160 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 DXOO77932 396 aaKnown RBP10.94□□□□□ -0.66
SF3B6-201ENST00000233468 MATN4O95460 622 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ITGA2BP08514 1039 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 RHOXF2BP0C7M4 288 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 MPSTP25325 297 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 GABRB3P28472 473 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 SPRP35270 261 aaPredicted RBP10.94□□□□□ -0.66
SF3B6-201ENST00000233468 GP5P40197 560 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 RAB28P51157 221 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 RAB15P59190 212 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ERVPABLB-1P60509 514 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 IL2P60568 153 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 GBX1Q14549 363 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 KLHL38Q2WGJ6 581 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 TMTC4Q5T4D3 741 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 GRTP1Q5TC63 336 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 HECTD2Q5U5R9 776 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 CACHD1Q5VU97 1274 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 FOXR1Q6PIV2 292 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF574Q6ZN55 896 aaPredicted RBP10.94□□□□□ -0.66
SF3B6-201ENST00000233468 GPR155Q7Z3F1 870 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ARHGAP22Q7Z5H3 698 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 VRK3Q8IV63 474 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 MYO1HQ8N1T3 1032 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ZNF843Q8N446 348 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 RSC1A1Q92681 617 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 FAM136AQ96C01 138 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ELMO2Q96JJ3 720 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 CYTH2Q99418 400 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 NDNQ99608 321 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 RHOXF2Q9BQY4 288 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ZPBPQ9BS86 351 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 ASPSCR1Q9BZE9 553 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 CPNE5Q9HCH3 593 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 SYTL2Q9HCH5 934 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 LRRC4CQ9HCJ2 640 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 OGFRQ9NZT2 677 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 SPATA7Q9P0W8 599 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 KLHL3Q9UH77 587 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 PCDHB11Q9Y5F2 797 aa10.94□□□□□ -0.66
SF3B6-201ENST00000233468 COL6A6A6NMZ7 2263 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 A0A1W2PNU3 283 aaPredicted RBP10.93□□□□□ -0.66
SF3B6-201ENST00000233468 PIPSLA2A3N6 862 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 A8MU76 341 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 B4E171 279 aa10.93□□□□□ -0.66
SF3B6-201ENST00000233468 SLC16A5O15375 505 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms