RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CSKP41240 450 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 AP1S2P56377 157 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 NFKB2Q00653 900 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 SCARB2Q14108 478 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 GANABQ14697 944 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 TNFAIP8L2Q6P589 184 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 AMIGO1Q86WK6 493 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 DNAJA4Q8WW22 397 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 KLK6Q92876 244 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 MAF1Q9H063 256 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 FKBP14Q9NWM8 211 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 DAPL1A0PJW8 107 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 GABRDO14764 452 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PCDH7O60245 1069 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 RPP38P78345 283 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 RFTN1Q14699 578 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 CCDC80Q76M96 950 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 CAND1Q86VP6 1230 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 UBE2J2Q8N2K1 259 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ZNF615Q8N8J6 731 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 DNAJB8Q8NHS0 232 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PCDH19Q8TAB3 1148 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 MTERF1Q99551 399 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 TFB2MQ9H5Q4 396 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 DNAJB9Q9UBS3 223 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ERVK-11Q9UQG0 969 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 NR2E1Q9Y466 385 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ZNF99A8MXY4 864 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 K7EPI3 171 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 SERPINA3P01011 423 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ALPPL2P10696 532 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PRKCHP24723 683 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 CRISP3P54108 245 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PUS10Q3MIT2 529 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PDE12Q6L8Q7 609 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 SMPDL3BQ92485 455 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 RIT1Q92963 219 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 RELTQ969Z4 430 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 COQ8BQ96D53 544 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ZSWIM3Q96MP5 696 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 TTYH1Q9H313 450 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 POLMQ9NP87 494 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 SIX2Q9NPC8 291 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 FABP12A6NFH5 140 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 SNX4O95219 450 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ECHS1P30084 290 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CHRNA4P43681 627 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ADAM8P78325 824 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 KIAA0930Q6ICG6 404 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CPNE8Q86YQ8 564 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 GAL3ST1Q99999 423 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 KAT8Q9H7Z6 458 aaKnown RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 IL36AQ9UHA7 158 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 SLC22A2O15244 555 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 VNN1O95497 513 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ARCN1P48444 511 aaKnown RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 RORCP51449 518 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CCNHP51946 323 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 MAPK14Q16539 360 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 AMZ2Q86W34 360 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 SLC22A15Q8IZD6 547 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 DTLQ9NZJ0 730 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 C9IYK1 514 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CAPN15O75808 1086 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CTSOP43234 321 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 GJA9P57773 515 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 RASGEF1BQ0VAM2 473 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 TMEM44Q2T9K0 475 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CARD16Q5EG05 197 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 IQCHQ86VS3 1027 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 EBF4Q9BQW3 602 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 SNTG1Q9NSN8 517 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 TTC24A2A3L6 582 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-201ENST00000230538 YJEFN3A6XGL0 299 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ORC5O43913 435 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CD2P06729 351 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 C8AP07357 584 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 FMO3P31513 532 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 MPIP34949 423 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 CCR8P51685 355 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 TAS2R39P59534 338 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 HERVK_113P63132 956 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 SP140Q13342 867 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 PTF1AQ7RTS3 328 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 KCT2Q8NC54 265 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 OR6K6Q8NGW6 343 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 TBX5Q99593 518 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 ERVK-6Q9BXR3 956 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 MALT1Q9UDY8 824 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 TLR6Q9Y2C9 796 aa11.33□□□□□ -0.6
LAMA4-201ENST00000230538 PCDHGB7Q9Y5F8 929 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms