RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CIB1Q99828 191 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 ITM2CQ9NQX7 267 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 DGKBQ9Y6T7 804 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 ZNF30P17039 623 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 CCR10P46092 362 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 MTPNP58546 118 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 LPCAT4Q643R3 524 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 RBM15BQ8NDT2 890 aaKnown RBP18.08■□□□□ 0.49
CLIP2-201ENST00000223398 OR5AK3PQ8NH89 298 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 MCCC2Q9HCC0 563 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 SLC2A4RGQ9NR83 387 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 IDH3BO43837 385 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 KLK1P06870 262 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 COL9A2Q14055 689 aaPredicted RBP18.08■□□□□ 0.48
CLIP2-201ENST00000223398 PLEKHG6Q3KR16 790 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 MBOAT1Q6ZNC8 495 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 ATCAYQ86WG3 371 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 A0A1W2PRB8 838 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 PRAMEF11O60813 436 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 CREB1P16220 341 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 LMAN2Q12907 356 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 GFOD2Q3B7J2 385 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 SFRP1Q8N474 314 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 FAM81AQ8TBF8 368 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 DGAT2Q96PD7 388 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 GPR174Q9BXC1 333 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 ZCCHC3Q9NUD5 404 aaKnown RBP18.08■□□□□ 0.48
CLIP2-201ENST00000223398 TSC22D4Q9Y3Q8 395 aa18.08■□□□□ 0.48
CLIP2-201ENST00000223398 MPIP34949 423 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 IDH3AP50213 366 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 DCAF12L1Q5VU92 463 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 SUSD1Q6UWL2 747 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 GPRIN1Q7Z2K8 1008 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 TMEM130Q8N3G9 435 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 METTL27Q8N6F8 245 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 NAT8LQ8N9F0 302 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 SLC25A36Q96CQ1 311 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 FAM92AA1XBS5 289 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 KMOO15229 486 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 GRID2O43424 1007 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 KLK3P07288 261 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 FOSL2P15408 326 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 CASRP41180 1078 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 SERINC3Q13530 473 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 TOR1AIP1Q5JTV8 583 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.07■□□□□ 0.487e-6■□□□□ 9.5
CLIP2-201ENST00000223398 ZNF648Q5T619 568 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 FAM156AQ8NDB6 213 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 TMEM40Q8WWA1 233 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 PIWIL1Q96J94 861 aaKnown RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 CXorf49A8MYA2 514 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 PLGP00747 810 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 NRG3P56975 720 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 ACTR3P61158 418 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 C1orf61Q13536 156 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 PEBP4Q96S96 227 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 IGFBP5P24593 272 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 KHKP50053 298 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 PRRT3Q5FWE3 981 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 GPRC6AQ5T6X5 926 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 SLC9B2Q86UD5 537 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 OR2T34Q8NGX1 318 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 OR2T3Q8NH03 318 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 KIFC1Q9BW19 673 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 TBL1XR1Q9BZK7 514 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 RIIAD1A6NNX1 92 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 FADS2O95864 444 aaKnown RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 RBM20Q5T481 1227 aaKnown RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 GPR65Q8IYL9 337 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 ZNF483Q8TF39 744 aaPredicted RBP18.07■□□□□ 0.48
CLIP2-201ENST00000223398 SHISA4Q96DD7 197 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 CALML5Q9NZT1 146 aa18.07■□□□□ 0.48
CLIP2-201ENST00000223398 NPHS1O60500 1241 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 POLR2CP19387 275 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 BMPR1AP36894 532 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 THOC6Q86W42 341 aaKnown RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 CAMKVQ8NCB2 501 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 TTLQ8NG68 377 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 SLC13A3Q8WWT9 602 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 RGMAQ96B86 450 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 AP4B1Q9Y6B7 739 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 ETV3P41162 512 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 FOLH1Q04609 750 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 GPR68Q15743 365 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 PUS10Q3MIT2 529 aaKnown RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 GALNT7Q86SF2 657 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 PIGXQ8TBF5 258 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 CDH22Q9UJ99 828 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 FADS2P1A8MWK0 482 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 ECDO95905 644 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 JMJD7P0C870 316 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 HERVK_113P63132 956 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 PITX1P78337 314 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 NTHL1P78549 312 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 ZNF433Q8N7K0 673 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 TSEN15Q8WW01 171 aaKnown RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 JPH3Q8WXH2 748 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 SCAMP4Q969E2 229 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 ERVK-6Q9BXR3 956 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 DLG5Q8TDM6 1919 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms