RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GPR149Q86SP6 731 aa16.9■□□□□ 0.3
USB1-201ENST00000219281 C10orf111Q8N326 155 aa16.9■□□□□ 0.3
USB1-201ENST00000219281 CARNMT1Q8N4J0 409 aa16.9■□□□□ 0.3
USB1-201ENST00000219281 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
USB1-201ENST00000219281 KAT8Q9H7Z6 458 aaKnown RBP16.9■□□□□ 0.3
USB1-201ENST00000219281 PCDHB14Q9Y5E9 798 aa16.9■□□□□ 0.3
USB1-201ENST00000219281 A0A1B0GVM2 712 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 LOC730098B7Z3J9 87 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 AXIN1O15169 862 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 COCHO43405 550 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 PRAMEF1O95521 474 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 PCMT1P22061 227 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 RGS4P49798 205 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 GP2P55259 537 aaKnown RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 CXorf57Q6NSI4 855 aaKnown RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 DET1Q7L5Y6 550 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 DCP2Q8IU60 420 aaKnown RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 TMCO5AQ8N6Q1 288 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 CNIH3Q8TBE1 160 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 SCLYQ96I15 445 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 CDK5RAP1Q96SZ6 601 aaKnown RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 LHX3Q9UBR4 397 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 ENPP5Q9UJA9 477 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 MANBAO00462 879 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 AREL1O15033 823 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 MAN1A2O60476 641 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 STC2O76061 302 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 HMGCLP35914 325 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 NRIP1P48552 1158 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 CERS6Q6ZMG9 384 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 ZCCHC7Q8N3Z6 543 aaKnown RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 CHCHD4Q8N4Q1 142 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 ARL10Q8N8L6 244 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 OR52E4Q8NGH9 312 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 WBP2Q969T9 261 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 FAM120BQ96EK7 910 aaKnown RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 ITCHQ96J02 903 aa16.89■□□□□ 0.29
USB1-201ENST00000219281 TMEFF2Q9UIK5 374 aaPredicted RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 FCF1Q9Y324 198 aaKnown RBP16.89■□□□□ 0.29
USB1-201ENST00000219281 XPNPEP2O43895 674 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 MITFO75030 526 aaPredicted RBP16.88■□□□□ 0.29
USB1-201ENST00000219281 NDUFS2O75306 463 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 MYCP01106 439 aaPredicted RBP16.88■□□□□ 0.29
USB1-201ENST00000219281 GSNP06396 782 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 RETP07949 1114 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 BMP1P13497 986 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 ITIH1P19827 911 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 DGKAP23743 735 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 RAD23AP54725 363 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 SPIDRQ14159 915 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 SMU1Q2TAY7 513 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 USP39Q53GS9 565 aaKnown RBP16.88■□□□□ 0.29
USB1-201ENST00000219281 PRSS55Q6UWB4 352 aaPredicted RBP16.88■□□□□ 0.29
USB1-201ENST00000219281 CHST9Q7L1S5 443 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 TRIM46Q7Z4K8 759 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 SH3YL1Q96HL8 342 aaPredicted RBP16.88■□□□□ 0.29
USB1-201ENST00000219281 TTLL2Q9BWV7 592 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 ASB8Q9H765 288 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 FBXO10Q9UK96 956 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 LRFN2Q9ULH4 789 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 B3GNT3Q9Y2A9 372 aa16.88■□□□□ 0.29
USB1-201ENST00000219281 TRBV5-3A0A0A0MS03 114 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 FAM220BPB1ANY3 271 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 BCKDKO14874 412 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ADAM12O43184 909 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 FZD6O60353 706 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 MYCLP1P12525 358 aaPredicted RBP16.87■□□□□ 0.29
USB1-201ENST00000219281 MZF1P28698 734 aaPredicted RBP16.87■□□□□ 0.29
USB1-201ENST00000219281 IDUAP35475 653 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 RHOAP61586 193 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 PHC1P78364 1004 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 IL5RAQ01344 420 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 GSTM4Q03013 218 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 CDK5R2Q13319 367 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 CTF1Q16619 201 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 HECTD3Q5T447 861 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ATG9BQ674R7 924 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 NIPAL1Q6NVV3 410 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 MBOAT1Q6ZNC8 495 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 BTLAQ7Z6A9 289 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 GALNT5Q7Z7M9 940 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ANKRD13BQ86YJ7 626 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 GALNT13Q8IUC8 556 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ULK4Q96C45 1275 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 MAGIXQ9H6Y5 334 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ORC6Q9Y5N6 252 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 TBKBP1A7MCY6 615 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ZNF99A8MXY4 864 aaPredicted RBP16.87■□□□□ 0.29
USB1-201ENST00000219281 PITPNM1O00562 1244 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 GAPDHSO14556 408 aaPredicted RBP16.87■□□□□ 0.29
USB1-201ENST00000219281 SCAMP3O14828 347 aaKnown RBP16.87■□□□□ 0.29
USB1-201ENST00000219281 BCKDHAP12694 445 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 RPS3P23396 243 aaKnown RBP eCLIP16.87■□□□□ 0.292e-6■■□□□ 14.1
USB1-201ENST00000219281 FSHRP23945 695 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 GZMMP51124 257 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 SFSWAPQ12872 951 aaKnown RBP16.87■□□□□ 0.29
USB1-201ENST00000219281 RAPSNQ13702 412 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 CYP2A13Q16696 494 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 ANKRD46Q86W74 232 aa16.87■□□□□ 0.29
USB1-201ENST00000219281 CALHM3Q86XJ0 350 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms