RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ALOX12P18054 663 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 PTNP21246 168 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 TMED10P49755 219 aaKnown RBP13.46□□□□□ -0.25
SIX4-201ENST00000216513 NCBP2P52298 156 aaKnown RBP eCLIP13.46□□□□□ -0.25
SIX4-201ENST00000216513 FAM220AQ7Z4H9 259 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 TTLQ8NG68 377 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 BCL2L14Q9BZR8 327 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 XKRYO14609 159 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 ADAM12O43184 909 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 MTX3Q5HYI7 312 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 FAM156AQ8NDB6 213 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 PDE9AO76083 593 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 ADRB3P13945 408 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 GLDCP23378 1020 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 PDX1P52945 283 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 ELF3P78545 371 aaPredicted RBP13.46□□□□□ -0.25
SIX4-201ENST00000216513 PRR5P85299 388 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 NR1D2Q14995 579 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 CYP27C1Q4G0S4 372 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 HDDC2Q7Z4H3 204 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 TMC8Q8IU68 726 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 RNASE11Q8TAA1 199 aaKnown RBP13.46□□□□□ -0.25
SIX4-201ENST00000216513 OR8D2Q9GZM6 311 aa13.46□□□□□ -0.25
SIX4-201ENST00000216513 ZNF860A6NHJ4 632 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 OR5K4A6NMS3 321 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 VSTM5A8MXK1 200 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 PRAMEF26H0Y7S4 382 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 CLOCKO15516 846 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 ATP5A1P25705 553 aaKnown RBP13.46□□□□□ -0.26
SIX4-201ENST00000216513 TPP2P29144 1249 aaPredicted RBP13.46□□□□□ -0.26
SIX4-201ENST00000216513 RXRGP48443 463 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 HEPACAMQ14CZ8 416 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 FAM91A1Q658Y4 838 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 TCF12Q99081 682 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 AGAP2Q99490 1192 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 SLC25A23Q9BV35 468 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 REEP1Q9H902 201 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 SCML1Q9UN30 329 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 CACNA1FO60840 1977 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 MYH1P12882 1939 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 SHISA7A6NL88 538 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 FNTBP49356 437 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 RAB28P51157 221 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 DSC1Q08554 894 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 ARSJQ5FYB0 599 aaPredicted RBP13.46□□□□□ -0.26
SIX4-201ENST00000216513 SLC13A3Q8WWT9 602 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 ARMC5Q96C12 935 aa13.46□□□□□ -0.26
SIX4-201ENST00000216513 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 BTNL10A8MVZ5 291 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 DCLK1O15075 740 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 PGLSO95336 258 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 PRKAR1AP10644 381 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 UNGP13051 313 aaPredicted RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 CREB1P16220 341 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 SHMT2P34897 504 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 CSNK1EP49674 416 aaKnown RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 FAM214AQ32MH5 1076 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 KLHL12Q53G59 568 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 ZNF57Q68EA5 555 aaPredicted RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 BTN2A1Q7KYR7 527 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 PAPOLBQ9NRJ5 636 aaKnown RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 C2P06681 752 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 IL1R2P27930 398 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 SLC1A2P43004 574 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 AFF1P51825 1210 aaKnown RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 HK2P52789 917 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 ID2Q02363 134 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 CCNIQ14094 377 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 C6orf132Q5T0Z8 1188 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 CUZD1Q86UP6 607 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 CDKN2AIPNLQ96HQ2 116 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 LRIG1Q96JA1 1093 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 UGT2B28Q9BY64 529 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 PAIP1Q9H074 479 aaKnown RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 ZNF334Q9HCZ1 680 aaPredicted RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 WASH3PC4AMC7 463 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 SAGP10523 405 aaPredicted RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 PTSQ03393 145 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 ANKRD46Q86W74 232 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 HM13Q8TCT9 377 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 ITM2CQ9NQX7 267 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 KCTD3Q9Y597 815 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 M0QZQ0 153 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 OR10H3O60404 316 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 OGNP20774 298 aaKnown RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 GJA4P35212 333 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 CHST14Q8NCH0 376 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 SEC14L3Q9UDX4 400 aa13.45□□□□□ -0.26
SIX4-201ENST00000216513 MRPS7Q9Y2R9 242 aaKnown RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 KIAA0100Q14667 2235 aaKnown RBP13.45□□□□□ -0.26
SIX4-201ENST00000216513 CHRM5P08912 532 aaPredicted RBP13.44□□□□□ -0.26
SIX4-201ENST00000216513 PTPRCAPQ14761 206 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 TTC27Q6P3X3 843 aa13.44□□□□□ -0.26
SIX4-201ENST00000216513 RTL4Q6ZR62 310 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms