RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FKTNO75072 461 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ACP5P13686 325 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 MAZP56270 477 aaKnown RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ID2Q02363 134 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 SMCO1Q147U7 214 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 IGDCC3Q8IVU1 814 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 DHX33Q9H6R0 707 aaKnown RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 CKLFQ9UBR5 152 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 YARS2Q9Y2Z4 477 aaKnown RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ATRNL1Q5VV63 1379 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SELPP16109 830 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 ENGP17813 658 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 KCNQ1P51787 676 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 RPL6Q02878 288 aaKnown RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 PRKCZQ05513 592 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 CLEC20AQ6ZU45 233 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 CPA6Q8N4T0 437 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 C2orf92A0A1B0GVN3 265 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 TBX10O75333 385 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 KDM4BO94953 1096 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 APOL3O95236 402 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 VARSP26640 1264 aaKnown RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 IL12BP29460 328 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 AGTR2P50052 363 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 C1QTNF8P60827 252 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 RPS14P62263 151 aaKnown RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC3A1Q07837 685 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 ADAP2Q9NPF8 381 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 NECTIN3Q9NQS3 549 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SHPRHQ149N8 1683 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 TPD52L2O43399 206 aaKnown RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 BCHEP06276 602 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 ALPPL2P10696 532 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 CD36P16671 472 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 ERVK-21P61565 698 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 LYSMD3Q7Z3D4 306 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 C11orf65Q8NCR3 313 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SEC14L1Q92503 715 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 COQ8BQ96D53 544 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 PIGUQ9H490 435 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 CCNB1IP1Q9NPC3 277 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 ZDHHC18Q9NUE0 388 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 INTS10Q9NVR2 710 aaKnown RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 GALPQ9UBC7 116 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 JUNP05412 331 aaKnown RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 DLG1Q12959 904 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 TIGD6Q17RP2 521 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 GPR135Q8IZ08 494 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 NAT8LQ8N9F0 302 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 TRPV1Q8NER1 839 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 PIGXQ8TBF5 258 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC13A3Q8WWT9 602 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC35G5Q96KT7 338 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 DHRS1Q96LJ7 313 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 PLEKHA1Q9HB21 404 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 IFT46Q9NQC8 304 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 PHPT1Q9NRX4 125 aaPredicted RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 CNTN6Q9UQ52 1028 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 DERAQ9Y315 318 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 B4DGG1 531 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 PDPK1O15530 556 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 CLDN7O95471 211 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SCGB1D2O95969 90 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 IDSP22304 550 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 GPX6P59796 221 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 C6orf183Q5T699 404 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SUSD1Q6UWL2 747 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 MMAAQ8IVH4 418 aaKnown RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC22A15Q8IZD6 547 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 NXPE1Q8N323 547 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 NFKBIDQ8NI38 313 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC35A5Q9BS91 424 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SRMSQ9H3Y6 488 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC7A8Q9UHI5 535 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 LGALS13Q9UHV8 139 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 SPIN1Q9Y657 262 aaPredicted RBP13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
TGFBR3-201ENST00000212355 GRXCR1A8MXD5 290 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 H3BNH8 94 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 CPN2P22792 545 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 CMPK1P30085 196 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 CNTD1Q8N815 330 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 COX18Q8N8Q8 333 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 PPP1R14BQ96C90 147 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 RIOK2Q9BVS4 552 aaKnown RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 NIFKQ9BYG3 293 aaKnown RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 FZD4Q9ULV1 537 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 PCDH7O60245 1069 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 CBFA2T3O75081 653 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 OR1E2P47887 323 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 GALNT10Q86SR1 603 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms