RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CPXM1Q96SM3 734 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 HBEGFQ99075 208 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SPATA9Q9BWV2 254 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 UCK2Q9BZX2 261 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 TRPV4Q9HBA0 871 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 ZBTB26Q9HCK0 441 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 PPLO60437 1756 aa10.26□□□□□ -0.77
VCL-201ENST00000211998 SMIM30A4D0T7 59 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 BTBD19C9JJ37 291 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 PTTG1O95997 202 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 PRKACGP22612 351 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 DNASE1P24855 282 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ADAM8P78325 824 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 FAPQ12884 760 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 TOR1AIP1Q5JTV8 583 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 PDE12Q6L8Q7 609 aaKnown RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 FAM171BQ6P995 826 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ZNF782Q6ZMW2 699 aaPredicted RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 FAM35AQ86V20 835 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 HID1Q8IV36 788 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 C3orf58Q8NDZ4 430 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 OR10G2Q8NGC3 310 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 CCDC107Q8WV48 283 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 COPS5Q92905 334 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 BIRC7Q96CA5 298 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 FAM84AQ96KN4 292 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 EXOC2Q96KP1 924 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 BRD7Q9NPI1 651 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ZNF639Q9UID6 485 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 MRPS23Q9Y3D9 190 aaKnown RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 CXorf49A8MYA2 514 aaPredicted RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 TBL1XO60907 577 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ANXA8P13928 327 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 GRK5P34947 590 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 GPR1P46091 355 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 WNT3AP56704 352 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 TBC1D25Q3MII6 688 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 CHST4Q8NCG5 386 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 OR5B17Q8NGF7 314 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 NRG4Q8WWG1 115 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 LGALS12Q96DT0 336 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 C8orf48Q96LL4 319 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 SMURF2Q9HAU4 748 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 RC3H2Q9HBD1 1191 aaKnown RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 PCDHB16Q9NRJ7 776 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ERVK13-1Q9NX77 482 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 HMGXB4Q9UGU5 601 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 RIMKLBQ9ULI2 386 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 MAP4K5Q9Y4K4 846 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 TCAF2A6NFQ2 919 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 EVI2BP34910 448 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 MATKP42679 507 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 RPP38P78345 283 aaKnown RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 FAM174BQ3ZCQ3 159 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 IFI44LQ53G44 452 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 AGMOQ6ZNB7 445 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 SSX6Q7RTT6 188 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ZNF548Q8NEK5 533 aaPredicted RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 ABHD11Q8NFV4 315 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 KAT2AQ92830 837 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 FUNDC2Q9BWH2 189 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 DUSP16Q9BY84 665 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 GULP1Q9UBP9 304 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 PPEF2O14830 753 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 GCATO75600 419 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 TOXO94900 526 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 CTNNB1P35222 781 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 OPRL1P41146 370 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 MAP2K3P46734 347 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 MRPS5P82675 430 aaKnown RBP10.25□□□□□ -0.77
VCL-201ENST00000211998 NAE1Q13564 534 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 GRK1Q15835 563 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 RAET1GQ6H3X3 334 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 PYHIN1Q6K0P9 492 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 NAT8LQ8N9F0 302 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 THAP6Q8TBB0 222 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 GRIN3AQ8TCU5 1115 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 CXorf40BQ96DE9 158 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 CSPG4P5Q96PW8 444 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 IL4I1Q96RQ9 567 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 SEMA3CQ99985 751 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ENAMQ9NRM1 1142 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 SLC17A6Q9P2U8 582 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 ZDHHC2Q9UIJ5 367 aa10.25□□□□□ -0.77
VCL-201ENST00000211998 H0YAE9 185 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 NME6O75414 186 aaPredicted RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 DNAJB5O75953 348 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 OR4F21O95013 312 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 FGF1P05230 155 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 HLCSP50747 726 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 ARSFP54793 590 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 MBTD1Q05BQ5 628 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 ZNF697Q5TEC3 545 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 EIF5AL1Q6IS14 154 aaKnown RBP10.24□□□□□ -0.77
VCL-201ENST00000211998 RGMBQ6NW40 437 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 DENND1CQ8IV53 801 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 CADM2Q8N3J6 435 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 SNX27Q96L92 541 aa10.24□□□□□ -0.77
VCL-201ENST00000211998 CKLFQ9UBR5 152 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms