RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 LGALS12Q96DT0 336 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 AURKBQ96GD4 344 aaPredicted RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 FCRL5Q96RD9 977 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PHOX2BQ99453 314 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 FER1L6Q2WGJ9 1857 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 H0YAE9 185 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 SSNA1O43805 119 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 BCAS1O75363 584 aaPredicted RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 JUNP05412 331 aaKnown RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 YES1P07947 543 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PAICSP22234 425 aaKnown RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 NCS1P62166 190 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 ATP6AP1Q15904 470 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 ATAT1Q5SQI0 421 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 Q6ZNX1 250 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 CYP2U1Q7Z449 544 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 IRGQQ8WZA9 623 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 STARD8Q92502 1023 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 Q96MT0 163 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 BEX2Q9BXY8 128 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 NKIRAS2Q9NYR9 191 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 MYBPHLA2RUH7 354 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PLOD2O00469 737 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PLA2G16P53816 162 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 DOK6Q6PKX4 331 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 OR13C4Q8NGS5 318 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 GTPBP3Q969Y2 492 aaKnown RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PAK1IP1Q9NWT1 392 aaPredicted RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 PCDHB9Q9Y5E1 797 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 CDK5RAP2Q96SN8 1893 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF831Q5JPB2 1677 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 PRMT5O14744 637 aaPredicted RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 FGF18O76093 207 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CYP2A7P20853 494 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 RPS3AP61247 264 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 IL18Q14116 193 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 PLEKHG7Q6ZR37 379 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 C16orf59Q7L2K0 433 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 NCSTNQ92542 709 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 FCGR1BQ92637 280 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 TADA1Q96BN2 335 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 NUSAP1Q9BXS6 441 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 ASAH2Q9NR71 780 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 ERVK-18Q9QC07 812 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CFL2Q9Y281 166 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 FABP12A6NFH5 140 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 RFPL2O75678 378 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 C9P02748 559 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CSF2P04141 144 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 HLA-DQB2P05538 268 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 GJA1P17302 382 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CTPS1P17812 591 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 GABRR2P28476 465 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CDH12P55289 794 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CSNK2BP67870 215 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 FOXM1Q08050 763 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM130Q8N3G9 435 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 PNPLA1Q8N8W4 532 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 INTS7Q9NVH2 962 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 C1orf109Q9NX04 203 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 ZDBF2Q9HCK1 2354 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 KPNA5O15131 536 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 ACOX3O15254 700 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 ITGA2P17301 1181 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC11A1P49279 550 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 MVKQ03426 396 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 C5orf22Q49AR2 442 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 PDE12Q6L8Q7 609 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CYP4Z2PQ8N1L4 340 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 AP3S1Q92572 193 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 POP5Q969H6 163 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 NSUN5Q96P11 429 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 TRNT1Q96Q11 434 aaKnown RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 ITPAQ9BY32 194 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 HAPLN2Q9GZV7 340 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 OLAHQ9NV23 265 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 CXXC1Q9P0U4 656 aaPredicted RBP11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 MAPRE3Q9UPY8 281 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 LYVE1Q9Y5Y7 322 aa11.31□□□□□ -0.6
DNMT3B-201ENST00000201963 LRRC14BA6NHZ5 514 aa11.3□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF701M0R085 212 aaPredicted RBP11.3□□□□□ -0.6
DNMT3B-201ENST00000201963 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
DNMT3B-201ENST00000201963 EOMESO95936 686 aa11.3□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF26P17031 533 aaPredicted RBP11.3□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC6A2P23975 617 aa11.3□□□□□ -0.6
DNMT3B-201ENST00000201963 OR4D2P58180 307 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms