RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 ZCCHC8Q6NZY4 707 aaKnown RBP8.1□□□□□ -1.11
CDC27-201ENST00000066544 DOK6Q6PKX4 331 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 SERPINA13PQ6UXR4 307 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 MICU2Q8IYU8 434 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 LMNTD1Q8N9Z9 388 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 GOLM1Q8NBJ4 401 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 CD99L2Q8TCZ2 262 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
CDC27-201ENST00000066544 ACPTQ9BZG2 426 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 RASSF1Q9NS23 344 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 PDE10AQ9Y233 779 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 NEUROG3Q9Y4Z2 214 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 PCDHB1Q9Y5F3 818 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 CASP8AP2Q9UKL3 1982 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 AREL1O15033 823 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 AOC2O75106 756 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 WDR47O94967 919 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 PRSS23O95084 383 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 NTRK1P04629 796 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 JAK1P23458 1154 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 PLA2G16P53816 162 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 VEPH1Q14D04 833 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 PERM1Q5SV97 790 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 C6orf141Q5SZD1 244 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 NECAB2Q7Z6G3 386 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 NPAS4Q8IUM7 802 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 HS6ST3Q8IZP7 471 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 SLC15A4Q8N697 577 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 C1orf109Q9NX04 203 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 DNAJB9Q9UBS3 223 aa8.1□□□□□ -1.11
CDC27-201ENST00000066544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 PER2O15055 1255 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 TULP3O75386 442 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 FKBP9O95302 570 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 DCTP40126 519 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 ATP13A5Q4VNC0 1218 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 ZNF648Q5T619 568 aaPredicted RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 TTC23Q5W5X9 447 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CERS6Q6ZMG9 384 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.09□□□□□ -1.113e-7■■■■□ 20.4
CDC27-201ENST00000066544 ZNF621Q6ZSS3 439 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 FKBP9P1Q75LS8 142 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 SNX20Q7Z614 316 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 VTCN1Q7Z7D3 282 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 PLD4Q96BZ4 506 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 NRBF2Q96F24 287 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 PLEKHA8Q96JA3 519 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CSF3RQ99062 836 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 MTERF1Q99551 399 aaKnown RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 TTLL2Q9BWV7 592 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 SLC22A14Q9Y267 594 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CCL27Q9Y4X3 112 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 ARNTLO00327 626 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 AXIN1O15169 862 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 UGT2B4P06133 528 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CRHBPP24387 322 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 KIAA0040Q15053 153 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 C5orf22Q49AR2 442 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 RETSATQ6NUM9 610 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 ANGPTL8Q6UXH0 198 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 UBE2R2Q712K3 238 aaPredicted RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 SPARTQ8N0X7 666 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CHDHQ8NE62 594 aaPredicted RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 UBE2FQ969M7 185 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 APIPQ96GX9 242 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 VN1R3Q9BXE9 311 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 VNN3Q9NY84 501 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 SH3PXD2BA1X283 911 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 PABPN1LA6NDY0 278 aaKnown RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 TRBC1P01850 177 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 KRT6AP02538 564 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 KRT6BP04259 564 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 MSH3P20585 1137 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 DCKP27707 260 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CD70P32970 193 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 KRT6CP48668 564 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 FPGSQ05932 587 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 NR1D2Q14995 579 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 SMN1Q16637 294 aaKnown RBP8.09□□□□□ -1.11
CDC27-201ENST00000066544 PTCHD3Q3KNS1 767 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CMTM8Q8IZV2 173 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 EID3Q8N140 333 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 PDPRQ8NCN5 879 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 BAG5Q9UL15 447 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 ZNF451Q9Y4E5 1061 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CHD5Q8TDI0 1954 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CLDN9O95484 217 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 ANXA5P08758 320 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 MAP2K4P45985 399 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 SP3Q02447 781 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 IRAK1BP1Q5VVH5 260 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 LRRC66Q68CR7 880 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 CRTC3Q6UUV7 619 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 BTLAQ7Z6A9 289 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 VRK3Q8IV63 474 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 DDHD1Q8NEL9 900 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 OR7A2PQ8NGA2 310 aa8.09□□□□□ -1.11
CDC27-201ENST00000066544 OR13F1Q8NGS4 319 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms