RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 U3KQV3 271 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 MICAL3Q7RTP6 2002 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 A0A1W2PQ67 120 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 ZBBXA8MT70 800 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 XYLBO75191 536 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 SH3BGRLO75368 114 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 ULK1O75385 1050 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 RFPL2O75678 378 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 CCR7P32248 378 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 IL1RL1Q01638 556 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 CRY1Q16526 586 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 MEP1AQ16819 746 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 GTDC1Q4AE62 458 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PDCD4Q53EL6 469 aaKnown RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 SERPINA13PQ6UXR4 307 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PIWIL3Q7Z3Z3 882 aaKnown RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 DDX53Q86TM3 631 aaKnown RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 VRK3Q8IV63 474 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 LIX1Q8N485 282 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 SNX19Q92543 992 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 ITCHQ96J02 903 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 CD244Q9BZW8 370 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 LHPPQ9H008 270 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 AASSQ9UDR5 926 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 SH3GLB1Q9Y371 365 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PLXNA4Q9HCM2 1894 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.83□□□□□ -0.35
CTNS-201ENST00000046640 GFRA2O00451 464 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 GNGT2O14610 69 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 FGF18O76093 207 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 CXCL14O95715 111 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 GSNP06396 782 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 CCNA2P20248 432 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 AKT1P31749 480 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 RPIAP49247 311 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 LSM3P62310 102 aaKnown RBP12.83□□□□□ -0.35
CTNS-201ENST00000046640 B4GALNT1Q00973 533 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 NFATC3Q12968 1075 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 MPPE1Q53F39 396 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 SPANXN4Q5MJ08 99 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 DHRS4L2Q6PKH6 230 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 DLEU7Q6UYE1 221 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 ANKRD46Q86W74 232 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 TBC1D21Q8IYX1 336 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 RGL4Q8IZJ4 473 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 CENPSQ8N2Z9 138 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.35
CTNS-201ENST00000046640 ZNF689Q96CS4 500 aaPredicted RBP12.83□□□□□ -0.35
CTNS-201ENST00000046640 AURKBQ96GD4 344 aaPredicted RBP12.83□□□□□ -0.35
CTNS-201ENST00000046640 BDH2Q9BUT1 245 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 HERC2P3Q9BVR0 1158 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 ATG10Q9H0Y0 220 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 ACTR8Q9H981 624 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 ZNF232Q9UNY5 417 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 COQ6Q9Y2Z9 468 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 OARD1Q9Y530 152 aa12.83□□□□□ -0.35
CTNS-201ENST00000046640 LRATO95237 230 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 OLFM2O95897 454 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 BCL10O95999 233 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 FUCA1P04066 466 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 DCKP27707 260 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 MTHFRP42898 656 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 MLLT10P55197 1068 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 EMX2Q04743 252 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 CD300CQ08708 224 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 CCNYL2Q5T2Q4 361 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 ENPP6Q6UWR7 440 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 R3HCC1LQ7Z5L2 792 aaKnown RBP12.83□□□□□ -0.36
CTNS-201ENST00000046640 HID1Q8IV36 788 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 PHACTR4Q8IZ21 702 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 DTWD1Q8N5C7 304 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 OR10A6Q8NH74 314 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 FOXJ1Q92949 421 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 BORCS5Q969J3 196 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 PDLIM5Q96HC4 596 aaKnown RBP12.83□□□□□ -0.36
CTNS-201ENST00000046640 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 IKZF5Q9H5V7 419 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 ZIM2Q9NZV7 527 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.36
CTNS-201ENST00000046640 OGDHLQ9ULD0 1010 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 FCGR1AP12314 374 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 EPB42P16452 691 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 ITPKAP23677 461 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 ALDH4A1P30038 563 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 ZXDCQ2QGD7 858 aaPredicted RBP12.83□□□□□ -0.36
CTNS-201ENST00000046640 HTR3DQ70Z44 454 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 BTLAQ7Z6A9 289 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 PDPRQ8NCN5 879 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 FIBINQ8TAL6 211 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 CYB5D2Q8WUJ1 264 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 COX4I2Q96KJ9 171 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 CCDC138Q96M89 665 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 COPS8Q99627 209 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 CGREF1Q99674 301 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 NTN4Q9HB63 628 aa12.83□□□□□ -0.36
CTNS-201ENST00000046640 TRNAU1APQ9NX07 287 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms