RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 UNC79Q9P2D8 2635 aa15.32■□□□□ 0.04
ERCC1-201ENST00000013807 DOPEY1Q5JWR5 2465 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 A0A0U1RQJ8 604 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 C9J4A7 227 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 OR2B3O76000 313 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 ONECUT2O95948 504 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 VARSP26640 1264 aaKnown RBP15.31■□□□□ 0.04
ERCC1-201ENST00000013807 KYNUQ16719 465 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 CCDC38Q502W7 563 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 FAM69BQ5VUD6 431 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 JMJD6Q6NYC1 403 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-201ENST00000013807 MRPL14Q6P1L8 145 aaKnown RBP15.31■□□□□ 0.04
ERCC1-201ENST00000013807 AFTPHQ6ULP2 937 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 ZNF534Q76KX8 674 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 RAB43Q86YS6 212 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 DNAAF3Q8N9W5 541 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 OR4L1Q8NH43 312 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 NUDT9Q9BW91 350 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 AP1M1Q9BXS5 423 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 KLHL25Q9H0H3 589 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 G3BP2Q9UN86 482 aaKnown RBP15.31■□□□□ 0.04
ERCC1-201ENST00000013807 SRPK3Q9UPE1 567 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 CAPN6Q9Y6Q1 641 aa15.31■□□□□ 0.04
ERCC1-201ENST00000013807 CENPEQ02224 2701 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
ERCC1-201ENST00000013807 OR1I1O60431 355 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 VPS4BO75351 444 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 SLCO2B1O94956 709 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 GAS8O95995 478 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 GOT2P00505 430 aaKnown RBP15.3■□□□□ 0.04
ERCC1-201ENST00000013807 IGHEP01854 428 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 CBSLP0DN79 551 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 PEBP1P30086 187 aaKnown RBP15.3■□□□□ 0.04
ERCC1-201ENST00000013807 CCR7P32248 378 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 CBSP35520 551 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 PPARGP37231 505 aaPredicted RBP15.3■□□□□ 0.04
ERCC1-201ENST00000013807 RAB28P51157 221 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 DCDP81605 110 aaKnown RBP15.3■□□□□ 0.04
ERCC1-201ENST00000013807 IGFL3Q6UXB1 125 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 HOOK3Q86VS8 718 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 EFCAB3Q8N7B9 438 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 Q8NA96 180 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 OR2Y1Q8NGV0 311 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 ASZ1Q8WWH4 475 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 ATG4AQ8WYN0 398 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 PNPLA2Q96AD5 504 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 ZNF778Q96MU6 729 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 SLC7A5P2Q9GIP4 190 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 SPRTNQ9H040 489 aaPredicted RBP15.3■□□□□ 0.04
ERCC1-201ENST00000013807 GPR83Q9NYM4 423 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 SLC2A6Q9UGQ3 507 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 VPS4AQ9UN37 437 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 PLCL2Q9UPR0 1127 aa15.3■□□□□ 0.04
ERCC1-201ENST00000013807 CCDC78A2IDD5 438 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 KLHL41O60662 606 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 PKLRP30613 574 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 GRIA1P42261 906 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 ATP1A4Q13733 1029 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 GRB7Q14451 532 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 BRD3Q15059 726 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 UNC5DQ6UXZ4 953 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 TRIM73Q86UV7 250 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 SLC13A5Q86YT5 568 aaPredicted RBP15.29■□□□□ 0.04
ERCC1-201ENST00000013807 RBMXL3Q8N7X1 1067 aaKnown RBP15.29■□□□□ 0.04
ERCC1-201ENST00000013807 SLC22A18Q96BI1 424 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 PTERQ96BW5 349 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 FER1L6-AS2Q96M78 137 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 TCAF1Q9Y4C2 921 aa15.29■□□□□ 0.04
ERCC1-201ENST00000013807 ITPR2Q14571 2701 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 ZNF185O15231 689 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 PRICKLE3O43900 615 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-201ENST00000013807 FKBP9O95302 570 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 RPN2P04844 631 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 CD9P21926 228 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 AOAHP28039 575 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 CDC25BP30305 580 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 SEMA3AQ14563 771 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 INPP5JQ15735 1006 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-201ENST00000013807 NKAIN1Q4KMZ8 207 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 SYTL3Q4VX76 610 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 AARS2Q5JTZ9 985 aaKnown RBP15.28■□□□□ 0.04
ERCC1-201ENST00000013807 DCAF10Q5QP82 559 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 VWA5B1Q5TIE3 1220 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 SLC6A19Q695T7 634 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 DRICH1Q6PGQ1 229 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-201ENST00000013807 NAPRTQ6XQN6 538 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 MRGPREQ86SM8 312 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 VRK3Q8IV63 474 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 LINC01555Q8NAE3 123 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 DENND1AQ8TEH3 1009 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 N4BP2L2Q92802 583 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-201ENST00000013807 ZNF285Q96NJ3 590 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 DESI2Q9BSY9 194 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 TSSK1BQ9BXA7 367 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 PAK5Q9P286 719 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 ZNF148Q9UQR1 794 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 TDRKHQ9Y2W6 561 aaKnown RBP15.28■□□□□ 0.04
ERCC1-201ENST00000013807 KLK4Q9Y5K2 254 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 NOTCH2Q04721 2471 aa15.28■□□□□ 0.04
ERCC1-201ENST00000013807 ISM1B1AKI9 464 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms