RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 TfamP40630 243 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Olfr325Q5NCD2 326 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Krtcap2Q5RL79 136 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Zfp78Q5U406 512 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Hs3st2Q673U1 367 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Cpsf6Q6NVF9 551 aaKnown RBP15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Pex11gQ6P6M5 241 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Ube2r2Q6ZWZ2 238 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Plekhs1Q8BW88 474 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Lrrtm3Q8BZ81 582 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Actr8Q8R2S9 624 aaKnown RBP15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Pgm3Q9CYR6 542 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 PacrglQ9D3X5 248 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 4930578G10RikQ9D4Q4 153 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Rfc2Q9WUK4 349 aaKnown RBP15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Zbtb18Q9WUK6 522 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Asb3Q9WV72 525 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Gm14781A2A9Q9 366 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Zfp558E9Q1J0 407 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 AF366264G3X9P9 502 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Ctnnd2O35927 1247 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Klf10O89091 479 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 P06324 132 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Prox1P48437 737 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Mageb5Q14AN0 366 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Ankrd13bQ5F259 626 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Gngt2Q61017 69 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Tfap2cQ61312 449 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 IpmkQ7TT16 396 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Wipi2Q80W47 445 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Zbtb24Q80X44 710 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Sh3rf2Q8BZT2 735 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Vmn1r185Q8R299 319 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Rbm12Q8R4X3 992 aaKnown RBP15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 PxnQ8VI36 591 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Rmnd5bQ91YQ7 393 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Diras1Q91Z61 198 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Frmd4bQ920B0 1035 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Tspan1Q99J59 240 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 EbplQ9D0P0 206 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Ppil1Q9D0W5 166 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Idh3aQ9D6R2 366 aaKnown RBP15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 Fads3Q9JJE7 449 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 ProdhQ9WU79 599 aa15.22■□□□□ 0.03
Vcan-201ENSMUST00000109543 4930455H04RikD3Z622 58 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Ptch2O35595 1182 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 CkmP07310 381 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Gstm1P10649 218 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Klkb1P26262 638 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Etv4P28322 485 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Slc25a51Q5HZI9 298 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Olfr381Q5SSP0 311 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Adora2bQ60614 332 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Ei24Q61070 340 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Enpp3Q6DYE8 874 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Fam167aQ6P1G6 215 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Dcaf13Q6PAC3 445 aaKnown RBP15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Ankrd9Q8BH83 326 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Rcor1Q8CFE3 480 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Vps50Q8CI71 964 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 HnrnpllQ921F4 591 aaKnown RBP15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Spz1Q99MY0 378 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Q9D112 206 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Pop5Q9DB28 169 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Aldh7a1Q9DBF1 539 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Tp73Q9JJP2 631 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Adam24Q9R160 761 aa15.21■□□□□ 0.03
Vcan-201ENSMUST00000109543 Tex16F6WNY1 1150 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Gm8011K7N6Y5 207 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Scamp3O35609 349 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Surf2P09926 257 aaKnown RBP15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Pdcd5P56812 126 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Armc7Q3UJZ3 198 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Rab26Q504M8 260 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Fam71bQ5STT6 665 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Nr1h2Q60644 446 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 FaddQ61160 205 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Runx3Q64131 409 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 CpmQ80V42 443 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Gbp9Q8BTS3 619 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Pwp1Q99LL5 501 aaKnown RBP15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Yaf2Q99LW6 179 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Slc22a17Q9D9E0 401 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Ddi1Q9DAF3 408 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Glipr1l1Q9DAG6 236 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Clec1bQ9JL99 229 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Zscan12Q9Z1D7 501 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Eml5Q8BQM8 1977 aa15.21■□□□□ 0.02
Vcan-201ENSMUST00000109543 Syndig1A2ANU3 258 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Slc28a1E9PXX9 648 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Kbtbd6E9PYD7 486 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Gm7275E9Q1B3 247 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Inpp5aE9QAS7 422 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Kbtbd7G5E8C2 690 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Slc32a1O35633 525 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Gtf2h4O70422 463 aaKnown RBP15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Mkln1O89050 735 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 AprtP08030 180 aa15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Hspa1bP17879 642 aaKnown RBP15.2■□□□□ 0.02
Vcan-201ENSMUST00000109543 Ca8P28651 291 aa15.2■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms