RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 MUC13Q9H3R2 512 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 INTS6Q9UL03 887 aaKnown RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 PCDHB14Q9Y5E9 798 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 PCDHB1Q9Y5F3 818 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 G3V2T6 193 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 MANBAO00462 879 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 PDYNP01213 254 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 THRBP10828 461 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 COL6A1P12109 1028 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 ALDH3A2P51648 485 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 HSPA14Q0VDF9 509 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 CTU2Q2VPK5 515 aaKnown RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 FAM98BQ52LJ0 330 aaKnown RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 R3HCC1LQ7Z5L2 792 aaKnown RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 BBS7Q8IWZ6 715 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 DRAXINQ8NBI3 349 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 ADAMTS16Q8TE57 1224 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 ULK4Q96C45 1275 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 MBOAT4Q96T53 435 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 ING2Q9H160 280 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 LRTM1Q9HBL6 345 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 PFDN4Q9NQP4 134 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 DNMT3BQ9UBC3 853 aaKnown RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 GNPTGQ9UJJ9 305 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 SH3BGRLO75368 114 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 DEAF1O75398 565 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 ITGALP20701 1170 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 GNPDA1P46926 289 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 ATP13A5Q4VNC0 1218 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 SPOUT1Q5T280 376 aaKnown RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 CCNYL2Q5T2Q4 361 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 FOXJ1Q92949 421 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 FAM162AQ96A26 154 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 ACTR8Q9H981 624 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 TUBA8Q9NY65 449 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-223ENST00000641597 PKD2L2Q9NZM6 624 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 VPS4AQ9UN37 437 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 SCN8AQ9UQD0 1980 aa16.45■□□□□ 0.22
PHGDH-223ENST00000641597 PRAMEF4O60810 478 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 PFDN1O60925 122 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 MITFO75030 526 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-223ENST00000641597 ABLIM3O94929 683 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 HTR1AP08908 422 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 PFKLP17858 780 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 DGKAP23743 735 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 FSHRP23945 695 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 CCR7P32248 378 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 RGS4P49798 205 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 ILF2Q12905 390 aaKnown RBP16.44■□□□□ 0.22
PHGDH-223ENST00000641597 LMAN2Q12907 356 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 TBC1D25Q3MII6 688 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 PRAMEF9Q5VWM5 478 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 ZC3H7AQ8IWR0 971 aaKnown RBP16.44■□□□□ 0.22
PHGDH-223ENST00000641597 SLC47A1Q96FL8 570 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 PPP3R2Q96LZ3 170 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 HIPK3Q9H422 1215 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 ARL15Q9NXU5 204 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 VNN3Q9NY84 501 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 EIF3LQ9Y262 564 aaKnown RBP16.44■□□□□ 0.22
PHGDH-223ENST00000641597 K7EPI3 171 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 CXCR6O00574 342 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 RGS14O43566 566 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 DIRAS1O95057 198 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 LHCGRP22888 699 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 AKT1P31749 480 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 PON2Q15165 354 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 SPATS1Q496A3 300 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 LRRC66Q68CR7 880 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 XAF1Q6GPH4 301 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 LAIR2Q6ISS4 152 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 SERPINA13PQ6UXR4 307 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 CERS6Q6ZMG9 384 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 ZDHHC13Q8IUH4 622 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 MYOCQ99972 504 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 EBPLQ9BY08 206 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 LHPPQ9H008 270 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 GPRC5BQ9NZH0 403 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 PPT2Q9UMR5 302 aa16.44■□□□□ 0.22
PHGDH-223ENST00000641597 FAF1Q9UNN5 650 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-223ENST00000641597 EFEMP2O95967 443 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 EPB42P16452 691 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 ITPKAP23677 461 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 HLCSP50747 726 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 MYBPC3Q14896 1274 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 PGS1Q32NB8 556 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 ZNF648Q5T619 568 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-223ENST00000641597 CRTC1Q6UUV9 634 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 GALNT5Q7Z7M9 940 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 NXPE1Q8N323 547 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 HJURPQ8NCD3 748 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-223ENST00000641597 SNX19Q92543 992 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 CSF3RQ99062 836 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 PDE10AQ9Y233 779 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 ELOVL7A1L3X0 281 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 GNGT2O14610 69 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 STK16O75716 305 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 SERPINA1P01009 418 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 CA8P35219 290 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 RPIAP49247 311 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms