RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RAD51AP1Q96B01 352 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 REPS1Q96D71 796 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 CATSPER2Q96P56 530 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 RAB11FIP5Q9BXF6 653 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 MRPL1Q9BYD6 325 aaKnown RBP9.49□□□□□ -0.89
PHGDH-215ENST00000641371 MKRN2Q9H000 416 aaKnown RBP9.49□□□□□ -0.89
PHGDH-215ENST00000641371 BTBD1Q9H0C5 482 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 PCBD2Q9H0N5 130 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 AKTIPQ9H8T0 292 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 ACTR8Q9H981 624 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 CD248Q9HCU0 757 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 KLC4Q9NSK0 619 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 ZIM2Q9NZV7 527 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 SPATA7Q9P0W8 599 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 DUSP12Q9UNI6 340 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 MAPRE3Q9UPY8 281 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 TMED5Q9Y3A6 229 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 ST14Q9Y5Y6 855 aa9.49□□□□□ -0.89
PHGDH-215ENST00000641371 COPG1Q9Y678 874 aaKnown RBP9.49□□□□□ -0.89
PHGDH-215ENST00000641371 RANBP2P49792 3224 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3DA0A087WVF3 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3IA0A087WXS9 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3EA0A087X179 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3KA0A087X1G2 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3FA6NER0 549 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 LRRC14BA6NHZ5 514 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 ARHGEF33A8MVX0 844 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3LB9A6J9 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 OR7A17O14581 309 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 PI15O43692 258 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 MGRN1O60291 552 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 ULK1O75385 1050 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 OR4F21O95013 312 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 C1orf105O95561 183 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 CAPN1P07384 714 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3HP0C7X1 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TSPAN8P19075 237 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 HTR1BP28222 390 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 MAPK1P28482 360 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 YPEL5P62699 121 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 KCNJ2P63252 427 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 ELF3P78545 371 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 EMX2Q04743 252 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 ART3Q13508 389 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 LAPTM5Q13571 262 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 PTK2BQ14289 1009 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 FASTKQ14296 549 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 IMPG1Q17R60 797 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 KIF19Q2TAC6 998 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TRMT5Q32P41 509 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 PTCHD3Q3KNS1 767 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 PDCD4Q53EL6 469 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 PAGE2BQ5JRK9 111 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3GQ6DHY5 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3CQ6IPX1 549 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 CAPN13Q6MZZ7 669 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 KIAA1211LQ6NV74 962 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 LETMD1Q6P1Q0 360 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 PRMT9Q6P2P2 845 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 HACD2Q6Y1H2 254 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 PRR23BQ6ZRT6 265 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 SYT13Q7L8C5 426 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 LONP2Q86WA8 852 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D3Q8IZP1 549 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 CDYL2Q8N8U2 506 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 SNX31Q8N9S9 440 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 KYQ8NBH2 561 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 RBM15BQ8NDT2 890 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 OR9A1PQ8NGU1 263 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 OR56A3Q8NH54 315 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 RPLP0P6Q8NHW5 317 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 SETD7Q8WTS6 366 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 DLG3Q92796 817 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 FOXJ1Q92949 421 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 USP7Q93009 1102 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 UBE2E3Q969T4 207 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 MRGPRX1Q96LB2 322 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 MIPEPQ99797 713 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 HAUS8Q9BT25 410 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 BRINP2Q9C0B6 783 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 EHD1Q9H4M9 534 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 SDR39U1Q9NRG7 319 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 ASIC5Q9NY37 505 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 NOP53Q9NZM5 478 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 ZFR2Q9UPR6 939 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 DMTF1Q9Y222 760 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 EIF3LQ9Y262 564 aaKnown RBP9.48□□□□□ -0.89
PHGDH-215ENST00000641371 SLC17A4Q9Y2C5 497 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 NDUFAF1Q9Y375 327 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 HEBP2Q9Y5Z4 205 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 KCNE2Q9Y6J6 123 aa9.48□□□□□ -0.89
PHGDH-215ENST00000641371 MYO10Q9HD67 2058 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 K7ESM1 405 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PLK4O00444 970 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 FPGTO14772 594 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 TNFRSF10CO14798 259 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 ZNF217O75362 1048 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 RSL1D1O76021 490 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 APBB3O95704 486 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms