RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ANKRD22Q5VYY1 191 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 DNAJC14Q6Y2X3 702 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 CMC1Q7Z7K0 106 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 ATCAYQ86WG3 371 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 PLD5Q8N7P1 536 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 C2orf69Q8N8R5 385 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 C12orf29Q8N999 325 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 INO80EQ8NBZ0 244 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 GLB1L3Q8NCI6 653 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 OR10Z1Q8NGY1 313 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 C12orf57Q99622 126 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 TUT1Q9H6E5 874 aaKnown RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 SIX2Q9NPC8 291 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 HEBP1Q9NRV9 189 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 SACM1LQ9NTJ5 587 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 MOCS1Q9NZB8 636 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 HCN2Q9UL51 889 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 PNMA8BQ9ULN7 279 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 CRYL1Q9Y2S2 319 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 GLYATL1P3A0A0U1RQE8 302 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 MEIOCA2RUB1 952 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 BCAS1O75363 584 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 TRUB2O95900 331 aaKnown RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 CYP2A7P20853 494 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 MSR1P21757 451 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 UBA1P22314 1058 aaKnown RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 CNTN1Q12860 1018 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 PON3Q15166 354 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 FBXO42Q6P3S6 717 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 PGBD2Q6P3X8 592 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 FAM124AQ86V42 546 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 OR2T12Q8NG77 320 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 ZNF671Q8TAW3 534 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 OMDQ99983 421 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 RNF32Q9H0A6 362 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 ADAM7Q9H2U9 754 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 SNX15Q9NRS6 342 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 PNPOQ9NVS9 261 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 RIMKLBQ9ULI2 386 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 MEMO1Q9Y316 297 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 ZNF143P52747 638 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 CDH15P55291 814 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 GRB14Q14449 540 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 PTPRNQ16849 979 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 FAM83AQ86UY5 434 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 CADM3Q8N126 398 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 OR7G2Q8NG99 324 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 BPIFB1Q8TDL5 484 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 FERD3LQ96RJ6 166 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 SPATC1LQ9H0A9 340 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 NXF3Q9H4D5 531 aaKnown RBP8.13□□□□□ -1.11
NECAP1-227ENST00000640648 SMURF1Q9HCE7 757 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 EMC7Q9NPA0 242 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 WWOXQ9NZC7 414 aa8.13□□□□□ -1.11
NECAP1-227ENST00000640648 LOC100130705A0A1B0GUX0 176 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 TOR1BO14657 336 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SCAMP1O15126 338 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ENTPD6O75354 484 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ZNF254O75437 659 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 KCNA5P22460 613 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 HNMTP50135 292 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 TGFB2P61812 414 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 TSPAN5P62079 268 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PMS2P3Q13401 168 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CAPSQ13938 189 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SF3A2Q15428 464 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SLC35G1Q2M3R5 365 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PTPN20Q4JDL3 420 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CDONQ4KMG0 1287 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ZCCHC12Q6PEW1 402 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CYS1Q717R9 158 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ILDR2Q71H61 639 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SKA3Q8IX90 412 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 DCP1BQ8IZD4 617 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SLC22A15Q8IZD6 547 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ZNF283Q8N7M2 679 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PSD4Q8NDX1 1056 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 GPRC5AQ8NFJ5 357 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 C11orf24Q96F05 449 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 COQ10AQ96MF6 247 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 OR2M2Q96R28 347 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 MCMBPQ9BTE3 642 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SAMHD1Q9Y3Z3 626 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 HES2Q9Y543 173 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CASTOR2A6NHX0 329 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PIGRP01833 764 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 LTA4HP09960 611 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 YBX3P16989 372 aaKnown RBP eCLIP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 TSPAN8P19075 237 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 EIF2S3P41091 472 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 TRAM1Q15629 374 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 COL13A1Q5TAT6 717 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SLC22A10Q63ZE4 541 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CHSY3Q70JA7 882 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SLC30A8Q8IWU4 369 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 REPS2Q8NFH8 660 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 OR13F1Q8NGS4 319 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 LRRC15Q8TF66 581 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms