RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 INPP5KQ9BT40 448 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 NTMT1Q9BV86 223 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 NPLQ9BXD5 320 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 DPY30Q9C005 99 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 RC3H2Q9HBD1 1191 aaKnown RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.15□□□□□ -0.94
NECAP1-225ENST00000640209 SLCO3A1Q9UIG8 710 aa9.15□□□□□ -0.94
NECAP1-225ENST00000640209 DYTNA2CJ06 578 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 LEFTY2O00292 366 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 TGM5O43548 720 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 LILRB3O75022 631 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 STK16O75716 305 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 PGRP06401 933 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CDK4P11802 303 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 EPB42P16452 691 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ELK4P28324 431 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SERPINA4P29622 427 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 POLR2IP36954 125 aaKnown RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 MNX1P50219 401 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CYP4F3Q08477 520 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 PMS2P3Q13401 168 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 DDX53Q86TM3 631 aaKnown RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CBARPQ8N350 705 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 OR2T12Q8NG77 320 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 OR8J3Q8NGG0 315 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 OR10Q1Q8NGQ4 319 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 OSCP1Q8WVF1 389 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 THUMPD3Q9BV44 507 aaKnown RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SLC46A2Q9BY10 475 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CLMPQ9H6B4 373 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ZDHHC6Q9H6R6 413 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 HPS4Q9NQG7 708 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ZDHHC3Q9NYG2 299 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 TRPS1Q9UHF7 1281 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 LSM7Q9UK45 103 aaKnown RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CDC14AQ9UNH5 594 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 EIF3LQ9Y262 564 aaKnown RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 KCNE1BA0A087WTH5 132 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 A0A087WXM4 84 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 TRBV5-3A0A0A0MS03 114 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 KANSL1LA0AUZ9 987 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 UPK3BL1B0FP48 263 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 UPK3BL2E5RIL1 263 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SLC28A1O00337 649 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 PRSS23O95084 383 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 UGT2B4P06133 528 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 GSNP06396 782 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 EBLN1P0CF75 366 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 MSH3P20585 1137 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CCR2P41597 374 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 RPIAP49247 311 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SLC7A9P82251 487 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 MAPKAPK3Q16644 382 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 IMPG1Q17R60 797 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 GPR33Q49SQ1 333 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 MPPE1Q53F39 396 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ZNF648Q5T619 568 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 NEK5Q6P3R8 708 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SLC39A5Q6ZMH5 540 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 DPY19L3Q6ZPD9 716 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 TPRG1Q6ZUI0 275 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ANKRD33Q7Z3H0 272 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 PATL1Q86TB9 770 aaKnown RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ANKRD46Q86W74 232 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-225ENST00000640209 CPXM2Q8N436 756 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SGCDQ92629 289 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ULK4Q96C45 1275 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ECHDC3Q96DC8 303 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SCRN2Q96FV2 425 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 MUS81Q96NY9 551 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 LYSMD1Q96S90 227 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SUV39H2Q9H5I1 410 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SMURF2Q9HAU4 748 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 RDH14Q9HBH5 336 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SERHLQ9NQF3 203 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 HCFC1R1Q9NWW0 138 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 ARL15Q9NXU5 204 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 SPG21Q9NZD8 308 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 TRIM17Q9Y577 477 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 DENND4CQ5VZ89 1909 aa9.14□□□□□ -0.95
NECAP1-225ENST00000640209 IFRD1O00458 451 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-225ENST00000640209 ALPLP05186 524 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 RAP2AP10114 183 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 ITGB8P26012 769 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 CDKN2CP42773 168 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 NSG1P42857 185 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 MTHFRP42898 656 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 ARSFP54793 590 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 HSPA14Q0VDF9 509 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 C4orf46Q504U0 113 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 RUNDC3AQ59EK9 446 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 LYPLAL1Q5VWZ2 237 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 C22orf39Q6P5X5 142 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 CNKSR3Q6P9H4 555 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 ABRAXAS1Q6UWZ7 409 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 GCNT7Q6ZNI0 430 aa9.13□□□□□ -0.95
NECAP1-225ENST00000640209 UBE2R2Q712K3 238 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms