RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 RAB11FIP5Q9BXF6 653 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 KCND1Q9NSA2 647 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 INTS10Q9NVR2 710 aaKnown RBP17.15■□□□□ 0.34
PTPN11-207ENST00000639857 PCYOX1Q9UHG3 505 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 PADI1Q9ULC6 663 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 PCDHB3Q9Y5E6 796 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 PCDHGA6Q9Y5G7 932 aa17.15■□□□□ 0.34
PTPN11-207ENST00000639857 SLC9B1P1A6NJY1 282 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 IQCF5A8MTL0 148 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 C21orf140B9A014 251 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 TERTO14746 1132 aaKnown RBP17.14■□□□□ 0.33
PTPN11-207ENST00000639857 ZNF185O15231 689 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 USP1O94782 785 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 RECKO95980 971 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 CHRM5P08912 532 aaPredicted RBP17.14■□□□□ 0.33
PTPN11-207ENST00000639857 ITGB6P18564 788 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 ATP5DP30049 168 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 RAB28P51157 221 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 EIF3BP55884 814 aaKnown RBP17.14■□□□□ 0.33
PTPN11-207ENST00000639857 DHX34Q14147 1143 aaKnown RBP17.14■□□□□ 0.33
PTPN11-207ENST00000639857 KIR2DS3Q14952 304 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 PPP1R7Q15435 360 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 LINC00303Q3SY05 128 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 PAPD7Q5XG87 772 aaKnown RBP17.14■□□□□ 0.33
PTPN11-207ENST00000639857 NAPRTQ6XQN6 538 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 OTOAQ7RTW8 1153 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 PCGF5Q86SE9 256 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 HOOK3Q86VS8 718 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 CILP2Q8IUL8 1156 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 STARD8Q92502 1023 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 SEC14L1Q92503 715 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 BIRC8Q96P09 236 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 TRAPPC9Q96Q05 1148 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 ARHGAP9Q9BRR9 750 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 XKR8Q9H6D3 395 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 LHX9Q9NQ69 397 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 CROTQ9UKG9 612 aa17.14■□□□□ 0.33
PTPN11-207ENST00000639857 USP27XA6NNY8 438 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 SCRG1O75711 98 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 TIAF1O95411 115 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 SPTBP11277 2137 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 ST6GAL1P15907 406 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 UGT2B7P16662 529 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 PKLRP30613 574 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 DLSTP36957 453 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 CDC20Q12834 499 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 PTK6Q13882 451 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 GPR19Q15760 415 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 TBR1Q16650 682 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 KYNUQ16719 465 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 ANKRD20A4Q4UJ75 823 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 CTSL3PQ5NE16 218 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 RNASEH2BQ5TBB1 312 aaKnown RBP17.13■□□□□ 0.33
PTPN11-207ENST00000639857 NEPROQ6NW34 567 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 BORAQ6PGQ7 559 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 CES3Q6UWW8 571 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 SYDE1Q6ZW31 735 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-207ENST00000639857 TMEM126BQ8IUX1 230 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 VRK3Q8IV63 474 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 UNC5BQ8IZJ1 945 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 KRT222Q8N1A0 295 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 ZNF843Q8N446 348 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 EXTL1Q92935 676 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 ZNF669Q96BR6 464 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-207ENST00000639857 PPM1MQ96MI6 270 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 OR2A14Q96R47 310 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 ADNPQ9H2P0 1102 aa17.13■□□□□ 0.33
PTPN11-207ENST00000639857 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
PTPN11-207ENST00000639857 ZCWPW2A0A1B0GU75 182 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 FKBP9O95302 570 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 TPBGLP0DKB5 382 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 CCNFP41002 786 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 TERF1P54274 439 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 CSE1LP55060 971 aaKnown RBP17.12■□□□□ 0.33
PTPN11-207ENST00000639857 GNG11P61952 73 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 LY6DQ14210 128 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 GBX1Q14549 363 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 SLC5A12Q1EHB4 618 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 TTC23LQ6PF05 361 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 ZNF517Q6ZMY9 492 aaPredicted RBP17.12■□□□□ 0.33
PTPN11-207ENST00000639857 C19orf47Q8N9M1 422 aaKnown RBP17.12■□□□□ 0.33
PTPN11-207ENST00000639857 FLVCR1-AS1Q8TAF5 88 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 CALML6Q8TD86 181 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 SLC22A18Q96BI1 424 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 TCTN2Q96GX1 697 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 NAPGQ99747 312 aaPredicted RBP17.12■□□□□ 0.33
PTPN11-207ENST00000639857 MENTQ9BUN1 341 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 GPR87Q9BY21 358 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 DDX47Q9H0S4 455 aaKnown RBP17.12■□□□□ 0.33
PTPN11-207ENST00000639857 ASIC3Q9UHC3 531 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 IL17BQ9UHF5 180 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 TUBD1Q9UJT1 453 aa17.12■□□□□ 0.33
PTPN11-207ENST00000639857 A0A0J9YY10 115 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 GOLGA8MH3BSY2 632 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 SMAPO00193 183 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 DNALI1O14645 258 aaPredicted RBP17.11■□□□□ 0.33
PTPN11-207ENST00000639857 PRB1P04280 392 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 TCN2P20062 427 aa17.11■□□□□ 0.33
PTPN11-207ENST00000639857 CYP4F2P78329 520 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms