RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PSMF1Q92530 271 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TGM7Q96PF1 710 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 OR2M4Q96R27 311 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TBX15Q96SF7 602 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TEX101Q9BY14 249 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 LRRC27Q9C0I9 530 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 FAM204AQ9H8W3 233 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 KLHL3Q9UH77 587 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 OR51B4Q9Y5P0 310 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 CORINQ9Y5Q5 1042 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ROS1P08922 2347 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 FREM1Q5H8C1 2179 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 A0A1B0GVC2 190 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 TSPAN11A1L157 253 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 A8MXQ7 604 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 HNRNPDLO14979 420 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 KIAA0391O15091 583 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 HCRTO43612 131 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 LDB2O43679 373 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ZBTB11O95625 1053 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 RPN1P04843 607 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 MED14OSP0DP75 135 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 POLR2CP19387 275 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 MX1P20591 662 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ADCY8P40145 1251 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ACTR1BP42025 376 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 SEPHS1P49903 392 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 IRAK1P51617 712 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 PMS1P54277 932 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ACTR1AP61163 376 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 YWHAGP61981 247 aaKnown RBP eCLIP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 TNP2Q05952 138 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ODF1Q14990 250 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 CARD16Q5EG05 197 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 RABGAP1LQ5R372 815 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 TMEM201Q5SNT2 666 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 PM20D1Q6GTS8 502 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ADNP2Q6IQ32 1131 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 C16orf54Q6UWD8 224 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 WDR53Q7Z5U6 358 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 SLC38A9Q8NBW4 561 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 RELL2Q8NC24 303 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 CAVIN3Q969G5 261 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ANKRD36BP1Q96IX9 119 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 NSMCE3Q96MG7 304 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 CRB3Q9BUF7 120 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 MLPHQ9BV36 600 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 KIAA1586Q9HCI6 787 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 POT1Q9NUX5 634 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 MKS1Q9NXB0 559 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 LRCH1Q9Y2L9 728 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 DOCK10Q96BY6 2186 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 LOC100289279A0A1B0GTE1 492 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 GABRR3A8MPY1 467 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 DEFB108AA8MXU0 73 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 E7EWF7 191 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 K7ENM7 598 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 CLDN5O00501 218 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 DNAJA2O60884 412 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 CEACAM5P06731 702 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 PYGLP06737 847 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 AMD1P17707 334 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 TPSB2P20231 275 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ZFP36P26651 326 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 JAM2P57087 298 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 SESN3P58005 492 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 DCDP81605 110 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 MAPK7Q13164 816 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ZNHIT3Q15649 155 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 TPSAB1Q15661 275 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 SLC5A12Q1EHB4 618 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 EMC4Q5J8M3 183 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 FAM26FQ5R3K3 315 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ZNF468Q5VIY5 522 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 MANEALQ5VSG8 457 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 RHBDD2Q6NTF9 364 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 C3P1Q6ZMU1 363 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 C1orf122Q6ZSJ8 110 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 DAW1Q8N136 415 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 LZTR1Q8N653 840 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ARIH2OSQ8N7S6 290 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 RNF139Q8WU17 664 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ZNF354BQ96LW1 612 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 RNF26Q9BY78 433 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 TRIM54Q9BYV2 358 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 WDR12Q9GZL7 423 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 CHRNA10Q9GZZ6 450 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 RMI1Q9H9A7 625 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 ARFGAP3Q9NP61 516 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 TMEM51Q9NW97 253 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 SAMD15Q9P1V8 674 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 SIX4Q9UIU6 781 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 CDC23Q9UJX2 597 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 HS3ST3B1Q9Y662 390 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 U3KQK5 164 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 SCN2AQ99250 2005 aa3.3□□□□□ -1.88
CCDC7-213ENST00000639290 YLPM1P49750 1951 aaKnown RBP3.3□□□□□ -1.88
CCDC7-213ENST00000639290 A0A1B0GTH9 108 aa3.29□□□□□ -1.88
CCDC7-213ENST00000639290 C2orf81A6NN90 581 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms