RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	UBA2	Q9UBT2	640 aa	Predicted RBP	11.94	□□□□□ -0.5
PXN-222	ENST00000637624	MAPRE3	Q9UPY8	281 aa		11.94	□□□□□ -0.5
PXN-222	ENST00000637624	N6AMT1	Q9Y5N5	214 aa		11.94	□□□□□ -0.5
PXN-222	ENST00000637624	GNG14	A0A1W2PPG7	69 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	CA12	O43570	354 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	DHFR	P00374	187 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	TST	Q16762	297 aa	Known RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	DCAF4L1	Q3SXM0	396 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ATAD3C	Q5T2N8	411 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	RETREG3	Q86VR2	466 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	TMEM130	Q8N3G9	435 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	METTL4	Q8N3J2	472 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ASB12	Q8WXK4	309 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ASIC4	Q96FT7	647 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	TEX12	Q9BXU0	123 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	GALP	Q9UBC7	116 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	UXT	Q9UBK9	157 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	OPTC	Q9UBM4	332 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	FAM234B	A2RU67	622 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ORC5	O43913	435 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	CNTN5	O94779	1100 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	GADD45A	P24522	165 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	CDH5	P33151	784 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	GLUD2	P49448	558 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	NDUFV1	P49821	464 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ARHGEF6	Q15052	776 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	PHACTR4	Q8IZ21	702 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ATP6V0D2	Q8N8Y2	350 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	PRDM8	Q9NQV8	689 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	VPS9D1	Q9Y2B5	631 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	ZNF646	O15015	1829 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	FABP3	P05413	133 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	PPM1F	P49593	454 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	BCL7A	Q4VC05	210 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	TMEM135	Q86UB9	458 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	CHDH	Q8NE62	594 aa	Predicted RBP	11.93	□□□□□ -0.5
PXN-222	ENST00000637624	LPCAT1	Q8NF37	534 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	CLPB	Q9H078	707 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	TNFSF13B	Q9Y275	285 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	MYO10	Q9HD67	2058 aa		11.93	□□□□□ -0.5
PXN-222	ENST00000637624	DNAJB5	O75953	348 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SERPINF2	P08697	491 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	CYP2C18	P33260	490 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	THPO	P40225	353 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	CRAT	P43155	626 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ERVK-8	P63133	956 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ACOX1	Q15067	660 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	EPHX4	Q8IUS5	362 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SPERT	Q8NA61	448 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	PHF10	Q8WUB8	498 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	DEDD2	Q8WXF8	326 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	GTPBP3	Q969Y2	492 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	LINGO1	Q96FE5	620 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	NECTIN4	Q96NY8	510 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	TNKS2	Q9H2K2	1166 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	MEAF6	Q9HAF1	191 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	CLEC4A	Q9UMR7	237 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	USP22	Q9UPT9	525 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	FAM220BP	B1ANY3	271 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	NUPL2	O15504	423 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	MAF	O75444	373 aa	Predicted RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ATXN8OS	P0DMR3	200 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ALDH6A1	Q02252	535 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	MAB21L1	Q13394	359 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ENPP6	Q6UWR7	440 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	NOXA1	Q86UR1	476 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	CACTIN-AS1	Q8N1I8	211 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	TOR1AIP2	Q8NFQ8	470 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	MED30	Q96HR3	178 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	MAEL	Q96JY0	434 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	INTS6	Q9UL03	887 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	LRFN2	Q9ULH4	789 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	DNAJC15	Q9Y5T4	150 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	MYH9	P35579	1960 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	MGAT4D	A6NG13	374 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	AGAP5	A6NIR3	686 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ENPP3	O14638	875 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	PDPK1	O15530	556 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SEC14L2	O76054	403 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	UROS	P10746	265 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	COX7A2	P14406	83 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ARL2	P36404	184 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	VEGFB	P49765	207 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SP3	Q02447	781 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SPDYE7P	Q495Y7	208 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	C11orf88	Q6PI97	169 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	NRARP	Q7Z6K4	114 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SYT12	Q8IV01	421 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	LSM14A	Q8ND56	463 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SLCO4A1	Q96BD0	722 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	ZNF195	O14628	629 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	SUV39H1	O43463	412 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	RPL6	Q02878	288 aa	Known RBP	11.92	□□□□□ -0.5
PXN-222	ENST00000637624	FOXM1	Q08050	763 aa		11.92	□□□□□ -0.5
PXN-222	ENST00000637624	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms