RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 KDELC1Q6UW63 502 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 Q6ZVL8 140 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ZNF765Q7L2R6 523 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TWIST2Q8WVJ9 160 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 USP7Q93009 1102 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 NAF1Q96HR8 494 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 RMDN2Q96LZ7 410 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 MYCBPQ99417 103 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 BDH2Q9BUT1 245 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 MVB12BQ9H7P6 319 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 NOL11Q9H8H0 719 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 C3orf14Q9HBI5 128 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 PREBQ9HCU5 417 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SPAG4Q9NPE6 437 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 HCFC1R1Q9NWW0 138 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RPS6KA6Q9UK32 745 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ZNF780BQ9Y6R6 833 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 BRWD1Q9NSI6 2320 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 EPG5Q9HCE0 2579 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 METTL12A8MUP2 240 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 H0Y858 1186 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 CCL22O00626 93 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 HS6ST1O60243 411 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 DEAF1O75398 565 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 COX4I1P13073 169 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 HLA-EP13747 358 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 ADRB3P13945 408 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 HOXD9P28356 352 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 MAT2AP31153 395 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 HSPA7P48741 367 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 STK19P49842 368 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 DUSP3P51452 185 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 CCR8P51685 355 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 CDH13P55290 713 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 HEPACAMQ14CZ8 416 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 FAM78AQ5JUQ0 283 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 ERICH5Q6P6B1 374 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 DPPA4Q7L190 304 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 CELF2-AS1Q8N7Q2 184 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 OR10G6Q8NH81 332 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 TFGQ92734 400 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 PPCDCQ96CD2 204 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 OR2M4Q96R27 311 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 GDF15Q99988 308 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 C19orf43Q9BQ61 176 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 RTKNQ9BST9 563 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 MYLK2Q9H1R3 596 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 SRA1Q9HD15 236 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 MARK1Q9P0L2 795 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 HCSTQ9UBK5 93 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 MRTO4Q9UKD2 239 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 CDV3Q9UKY7 258 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 CDC14AQ9UNH5 594 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 INVSQ9Y283 1065 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 TTC34A8MYJ7 566 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 CLDN4O14493 209 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 FFAR3O14843 346 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 GPR42O15529 346 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 SIN3BO75182 1162 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 NIPSNAP2O75323 286 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 IGLV3-27P01718 113 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 ATP6V1C1P21283 382 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 CDH3P22223 829 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 SHMT2P34897 504 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 IFNGR2P38484 337 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 RABIFP47224 123 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 RAD23AP54725 363 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 LSM11P83369 360 aaKnown RBP eCLIP5.41□□□□□ -1.54
CHD2-227ENST00000637572 SRSF11Q05519 484 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 ZNF33BQ06732 778 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 CSTF3Q12996 717 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 ZC3H14Q6PJT7 736 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 ZNF621Q6ZSS3 439 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 OXR1Q8N573 874 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 CXCL16Q9H2A7 254 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 IL1RAPL1Q9NZN1 696 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 TRPC4Q9UBN4 977 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 GULP1Q9UBP9 304 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 SLC2A6Q9UGQ3 507 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 GMEB2Q9UKD1 530 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 DMTF1Q9Y222 760 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 TCRBV21S2A2A0A5A6 115 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 TK2O00142 265 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 TOR1BO14657 336 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 LAMTOR5O43504 91 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 RNGTTO60942 597 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 PIAS1O75925 651 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 MT-CO1P00395 513 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 PENKP01210 267 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 EBLN1P0CF75 366 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 ZNF37AP17032 561 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 ITPKAP23677 461 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 FASP25445 335 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 VARSP26640 1264 aaKnown RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 CD68P34810 354 aaPredicted RBP5.41□□□□□ -1.54
CHD2-227ENST00000637572 VHLP40337 213 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 KIR3DL1P43629 444 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 NRLP54845 237 aa5.41□□□□□ -1.54
CHD2-227ENST00000637572 FBXW4P57775 412 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms