RNA–Protein interactions for RNA: ENST00000637301.1

CACNA1D-223, Transcript of calcium voltage-gated channel subunit alpha1 D, human

TSL 5

Gene CACNA1D, Length 216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1D-223	ENST00000637301	SPDYE6	P0CI01	402 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	RAP2A	P10114	183 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	IFI30	P13284	250 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	PHKG2	P15735	406 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	TFE3	P19532	575 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	MAG	P20916	626 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	AGXT	P21549	392 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	LHCGR	P22888	699 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	RPS3	P23396	243 aa	Known RBP eCLIP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CA5A	P35218	305 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SOX6	P35712	828 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ATP5C1	P36542	298 aa	Known RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	LIPA	P38571	399 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	KIR2DL3	P43628	341 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	MAP2K4	P45985	399 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	BAG6	P46379	1132 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	PXN	P49023	591 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	VEGFC	P49767	419 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	GSK3B	P49841	420 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	P2RY4	P51582	365 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CYP2J2	P51589	502 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CLCN3	P51790	818 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CLCN4	P51793	760 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	LIMK2	P53671	638 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ATXN3	P54252	364 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	KCNK10	P57789	538 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	BPIFB3	P59826	476 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SPCS3	P61009	180 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	AP1S1	P61966	158 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	YWHAE	P62258	255 aa	Known RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	PSMC6	P62333	389 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	RAC1	P63000	192 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ERVK-8	P63133	956 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ROR1	Q01973	937 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	DHODH	Q02127	395 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CACNB1	Q02641	598 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SLC25A11	Q02978	314 aa	Known RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ACY1	Q03154	408 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	HSF2	Q03933	536 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	GABPA	Q06546	454 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	PIGF	Q07326	219 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ZNF543	Q08ER8	600 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	TFDP2	Q14188	446 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	GBX1	Q14549	363 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SSPN	Q14714	243 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	GRM7	Q14831	915 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	LARS2	Q15031	903 aa	Known RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ZNF79	Q15937	498 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	KYAT1	Q16773	422 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CYP51A1	Q16850	503 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	HFE	Q30201	348 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ZNF528	Q3MIS6	628 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SUPT20HL1	Q3ZLR7	823 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SPDYE2	Q495Y8	402 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	AGK	Q53H12	422 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	C2CD6	Q53TS8	623 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	NHLRC3	Q5JS37	347 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	KIAA0319	Q5VV43	1072 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	KIAA1614	Q5VZ46	1190 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	FAM160B1	Q5W0V3	765 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	RAP1GAP2	Q684P5	730 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ZNF425	Q6IV72	752 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	EFCAB12	Q6NXP0	572 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	FAM180B	Q6P0A1	224 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CNST	Q6PJW8	725 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	BLOC1S3	Q6QNY0	202 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	METAP1D	Q6UB28	335 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SUSD1	Q6UWL2	747 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	C15orf39	Q6ZRI6	1047 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	LARP4	Q71RC2	724 aa	Known RBP eCLIP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CEP68	Q76N32	757 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	RAB11FIP2	Q7L804	512 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SHF	Q7M4L6	423 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	OTOP1	Q7RTM1	612 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	PIWIL4	Q7Z3Z4	852 aa	Known RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	LHFPL3	Q86UP9	236 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	ZC3HC1	Q86WB0	502 aa	Known RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	MIB1	Q86YT6	1006 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SPPL2C	Q8IUH8	684 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	IFNL2	Q8IZJ0	200 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	OR8H3	Q8N146	312 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	PIAS4	Q8N2W9	510 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SLC43A2	Q8N370	569 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	TBC1D19	Q8N5T2	526 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	EMC1	Q8N766	993 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	MARCH10	Q8NA82	808 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	IL17RC	Q8NAC3	791 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	SLC37A3	Q8NCC5	494 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	DNER	Q8NFT8	737 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	OR6P1	Q8NGX9	317 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	OR5K1	Q8NHB7	308 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CHTF18	Q8WVB6	975 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	TMBIM1	Q969X1	311 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	FAF2	Q96CS3	445 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	MRPL48	Q96GC5	212 aa	Known RBP	3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	CRELD1	Q96HD1	420 aa		3.68	□□□□□ -1.82
CACNA1D-223	ENST00000637301	PAWR	Q96IZ0	340 aa	Known RBP	3.68	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms