RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SP8Q8IXZ3 490 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AGAP4Q96P64 663 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF286AQ9HBT8 521 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SGK2Q9HBY8 427 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 KLRF1Q9NZS2 232 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AP4B1Q9Y6B7 739 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 VEGFDO43915 354 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LCMT2O60294 686 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SH3BGRLO75368 114 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LTA4HP09960 611 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SLC6A4P31645 630 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 MLLT3P42568 568 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PPP2CBP62714 309 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SPOCK1Q08629 439 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NRF1Q16656 503 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ATAT1Q5SQI0 421 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PHF19Q5T6S3 580 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SLC43A3Q8NBI5 491 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZBED6CLQ96FA7 236 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CPXM1Q96SM3 734 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ANKRA2Q9H9E1 313 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CDHR5Q9HBB8 845 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NDUFAF4Q9P032 175 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FAM205AQ6ZU69 1335 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CASTOR2A6NHX0 329 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 BBIP1A8MTZ0 92 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 UBFD1O14562 309 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CYP21A2P08686 494 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF92Q03936 586 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SLC10A1Q14973 349 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NTRK2Q16620 822 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 Q1RN00 199 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GCNT6Q5T4J0 391 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FAM199XQ6PEV8 388 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FRMD7Q6ZUT3 714 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LRRC57Q8N9N7 239 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PSD4Q8NDX1 1056 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 OR4K17Q8NGC6 315 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 RDH11Q8TC12 318 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SETD7Q8WTS6 366 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 FCGR1BQ92637 280 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 HNRNPABQ99729 332 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 APBA2Q99767 749 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PPA2Q9H2U2 334 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 DDX43Q9NXZ2 648 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 TAS2R1Q9NYW7 299 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 hCG_1809904A0A1W2PP81 198 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1W2PPE2 198 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1W2PR64 198 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1W2PRV1 198 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 DHRS12A0PJE2 317 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ACOT7O00154 380 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GRM6O15303 877 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 DIRAS3O95661 229 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 IFNW1P05000 195 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CYP3A4P08684 503 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NUDT7P0C024 238 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CYP4B1P13584 511 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 VEGFCP49767 419 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SLC20A2Q08357 652 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SCGB2B2Q4G0G5 96 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NKAPLQ5M9Q1 402 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CFAP206Q8IYR0 622 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SLAIN1Q8ND83 568 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NDNFQ8TB73 568 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NANOS1Q8WY41 292 aaKnown RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LGR6Q9HBX8 967 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 MKKSQ9NPJ1 570 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PPP4R1LQ9P1A2 415 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 LRFN1Q9P244 771 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NPC1O15118 1278 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PSMD10O75832 226 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GZMAP12544 262 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 HNRNPLP14866 589 aaKnown RBP eCLIP5.92□□□□□ -1.468e-7■■■□□ 16.4
SCN1A-212ENST00000636194 GNAZP19086 355 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 MPIP34949 423 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 NRIP1P48552 1158 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GMPSP49915 693 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 RORCP51449 518 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GNG2P59768 71 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF45Q02386 682 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 HLFQ16534 295 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 UBE2NLQ5JXB2 153 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GLRA4Q5JXX5 417 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 BAIAP2L2Q6UXY1 529 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 HORMAD2Q8N7B1 307 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CREB3L1Q96BA8 519 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 OXNAD1Q96HP4 312 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF347Q96SE7 839 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 CORO1BQ9BR76 489 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SLC40A1Q9NP59 571 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 C1orf109Q9NX04 203 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SH3BGRL2Q9UJC5 107 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 GJD2Q9UKL4 321 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 TBX22Q9Y458 520 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 SHANK2Q9UPX8 1470 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 C20orf202A1L168 122 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 BTBD17A6NE02 478 aa5.92□□□□□ -1.46
SCN1A-212ENST00000636194 PRORSD1PA6NEY8 169 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms