RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 OR52J3Q8NH60 311 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF461Q8TAF7 563 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PHOSPHO2Q8TCD6 241 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 LRRC8CQ8TDW0 803 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 OR1E3Q8WZA6 343 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 STARD8Q92502 1023 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 AKAP1Q92667 903 aaKnown RBP eCLIP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ARRDC3Q96B67 414 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PPP1R14BQ96C90 147 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 HDAC11Q96DB2 347 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 C5orf30Q96GV9 206 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PGAM5Q96HS1 289 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SPATA13Q96N96 652 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ANKRD27Q96NW4 1050 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PANX2Q96RD6 677 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 INTS14Q96SY0 518 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PARK7Q99497 189 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TSG101Q99816 390 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 FERMT1Q9BQL6 677 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PIMREGQ9BSJ6 248 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ADGRE3Q9BY15 652 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 RTN4RQ9BZR6 473 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 RHBGQ9H310 441 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SLC32A1Q9H598 525 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TDRD3Q9H7E2 651 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 UPF2Q9HAU5 1272 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 DNAJC11Q9NVH1 559 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 BEX4Q9NWD9 120 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 MTMR4Q9NYA4 1195 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 WWOXQ9NZC7 414 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 KCND2Q9NZV8 630 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 VPS54Q9P1Q0 977 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 STX18Q9P2W9 335 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 COPG2Q9UBF2 871 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TRPC4Q9UBN4 977 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TRMT6Q9UJA5 497 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 VPS4AQ9UN37 437 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PPIEQ9UNP9 301 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CFL2Q9Y281 166 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 B3GNT3Q9Y2A9 372 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 MRPS7Q9Y2R9 242 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 LIPGQ9Y5X9 500 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 AP4B1Q9Y6B7 739 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 AOX1Q06278 1338 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SPATA31A5Q5VU36 1347 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SPATA31A7Q8IWB4 1347 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SH3TC1Q8TE82 1336 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PARD3Q8TEW0 1356 aa2.9□□□□□ -1.94
PSPC1-208ENST00000635562 A0A075B6Q4 140 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 A0A087WV48 116 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 A0A087WZY1 265 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 A0A0U1RQS6 177 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 FAM237BA0A1B0GVD1 139 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 A0A1W2PQM1 296 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ERICH2A1L162 156 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ELOVL7A1L3X0 281 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 GAGE10A6NGK3 116 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 NPIPB13A6NJU9 1138 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ANXA2P2A6NMY6 339 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 NPIPB5A8MRT5 1133 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KDM4EB2RXH2 506 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KCNJ18B7U540 433 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 NPIPB4C9JG80 1138 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PRR23D1E9PI22 279 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 POC1B-GALNT4F8VUJ3 575 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 GRM8O00222 908 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SLC30A4O14863 429 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 EIF3DO15371 548 aaKnown RBP eCLIP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 LRRTM2O43300 516 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KCNAB3O43448 404 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF189O75820 626 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KRT36O76013 467 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RHOBTB1O94844 696 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 LGI1O95970 557 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 AGTP01019 485 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PENKP01210 267 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ALDOAP04075 364 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 YES1P07947 543 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RETP07949 1114 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 FHP07954 510 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CELA2AP08217 269 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RFPL3SP0C7P2 107 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PABPC4LP0CB38 370 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 NHLRC4P0CG21 123 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PRR23D2P0DMB1 279 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 DDX5P17844 614 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 GABRB1P18505 474 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CD27P26842 260 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 OTX2P32243 289 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 MC5RP33032 325 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PTGER1P34995 402 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SOAT1P35610 550 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PBX3P40426 434 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SLC15A1P46059 708 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 GABRB2P47870 512 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 POU3F4P49335 361 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ALDH7A1P49419 539 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PSMD7P51665 324 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 MNAT1P51948 309 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms