RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MINDY1Q8N5J2 469 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 BATF3Q9NR55 127 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 MKS1Q9NXB0 559 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 NOP53Q9NZM5 478 aaKnown RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 LNPEPQ9UIQ6 1025 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 LRP4O75096 1905 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 PTPRZ1P23471 2315 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 DCHS1Q96JQ0 3298 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 TDRD6O60522 2096 aaKnown RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 TRBV23OR9-2A0A075B6M9 112 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 NEMP2A6NFY4 417 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 B4DGG1 531 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 LMO7DNF2Z398 122 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 EIF3FO00303 357 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 KLF11O14901 512 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 TOP3BO95985 862 aaKnown RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 LTA4HP09960 611 aaKnown RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 DHRS4L1P0CG22 281 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 MPC1LP0DKB6 136 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 HALP42357 657 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 DLG1Q12959 904 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 FAM83EQ2M2I3 478 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 UAP1L1Q3KQV9 507 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 LRRC8EQ6NSJ5 796 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 PDZD3Q86UT5 571 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 CENPLQ8N0S6 344 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 SLC25A45Q8N413 288 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 MGARPQ8TDB4 240 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 LRRC8CQ8TDW0 803 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 C10orf82Q8WW14 230 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 NXNL1Q96CM4 212 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 UBXN10Q96LJ8 280 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 RMDN2Q96LZ7 410 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 C12orf66Q96MD2 445 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 FOPNLQ96NB1 174 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 NMRAL1Q9HBL8 299 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 IGSF5Q9NSI5 407 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 IMP3Q9NV31 184 aaKnown RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 CFAP20Q9Y6A4 193 aaKnown RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 NPEPPSL1A6NEC2 478 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 OR52A4PA6NMU1 304 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 BTN3A1O00481 513 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 COPEO14579 308 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 KLHL2O95198 593 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 F3P13726 295 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 CD1DP15813 335 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 SLC26A3P40879 764 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 GLRBP48167 497 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 CLCA4Q14CN2 919 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 AASDHQ4L235 1098 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-208ENST00000634934 AGAP9Q5VTM2 703 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 ABRAXAS1Q6UWZ7 409 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 WASH2PQ6VEQ5 465 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 CYHR1Q6ZMK1 362 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 SH2D5Q6ZV89 423 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 NEK10Q6ZWH5 1172 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 PLD6Q8N2A8 252 aaKnown RBP14.09□□□□□ -0.15
LINC00339-208ENST00000634934 SDR16C5Q8N3Y7 309 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 SAP25Q8TEE9 199 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 ZDHHC1Q8WTX9 485 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 TFGQ92734 400 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-208ENST00000634934 PDLIM5Q96HC4 596 aaKnown RBP14.09□□□□□ -0.15
LINC00339-208ENST00000634934 SCYL1Q96KG9 808 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 LRRC37BQ96QE4 947 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 INSM2Q96T92 566 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-208ENST00000634934 DERL2Q9GZP9 239 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 WASH6PQ9NQA3 447 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 ZNF358Q9NW07 568 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 SCHIP1Q9P0W5 487 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-208ENST00000634934 SIRPGQ9P1W8 387 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 CSNK1G3Q9Y6M4 447 aa14.09□□□□□ -0.15
LINC00339-208ENST00000634934 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.08□□□□□ -0.16
LINC00339-208ENST00000634934 CDC7O00311 574 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 ZBTB14O43829 449 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 SPAG7O75391 227 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 COL6A2P12110 1019 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 ACADLP28330 430 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 CCNFP41002 786 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 ATP6V0D1P61421 351 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 SLC18A2Q05940 514 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 KRT33BQ14525 404 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 RPE65Q16518 533 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 WASHC2DQ5SRD0 308 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 CAPRIN2Q6IMN6 1127 aaKnown RBP14.08□□□□□ -0.16
LINC00339-208ENST00000634934 DUS1LQ6P1R4 473 aaKnown RBP14.08□□□□□ -0.16
LINC00339-208ENST00000634934 KLC3Q6P597 504 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 IYDQ6PHW0 289 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 LVRNQ6Q4G3 990 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 CLEC14AQ86T13 490 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 SFTPA2Q8IWL1 248 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 BANPQ8N9N5 519 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 PHC3Q8NDX5 983 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 PATE1Q8WXA2 126 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 IKZF3Q9UKT9 509 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 PCOLCE2Q9UKZ9 415 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 ASF1AQ9Y294 204 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 C15orf41Q9Y2V0 281 aa14.08□□□□□ -0.16
LINC00339-208ENST00000634934 A6NCN8 305 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 SLC2A4P14672 509 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms