RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ASB18Q6ZVZ8 466 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 FBXO16Q8IX29 292 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 ZNF433Q8N7K0 673 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 GPR22Q99680 433 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 FUNDC2Q9BWH2 189 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 AGO3Q9H9G7 860 aaKnown RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 BPIFA1Q9NP55 256 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 TREM1Q9NP99 234 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 C14orf105Q9NVL8 296 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 POLR1DQ9Y2S0 133 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 DLX3O60479 287 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 HTR1EP28566 365 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MSS51Q4VC12 460 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 FAM76BQ5HYJ3 339 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 NCEH1Q6PIU2 408 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 DPY19L3Q6ZPD9 716 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 DSG4Q86SJ6 1040 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ZBTB2Q8N680 514 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 LILRB4Q8NHJ6 448 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 IFT27Q9BW83 186 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ZNF69Q9UC07 566 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MYH1P12882 1939 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 A8MV72 311 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 B8ZZF3 427 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 RFPL1O75677 317 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 UPK1BO75841 260 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 NDST3O95803 873 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 L1CAMP32004 1257 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 SLC1A2P43004 574 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 CACNG1Q06432 222 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 RGS1Q08116 209 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 PMS2P3Q13401 168 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 WSCD1Q658N2 575 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 RAP1GAP2Q684P5 730 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ZNF557Q8N988 423 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 ABHD11Q8NFV4 315 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 GAB3Q8WWW8 586 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 TCEAL4Q96EI5 215 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 UROC1Q96N76 676 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 HAPLN3Q96S86 360 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MRIQ9BWK5 157 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ATP13A3Q9H7F0 1226 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 TVP23BQ9NYZ1 205 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 DTLQ9NZJ0 730 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 E7ESA3 106 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ARCN1P48444 511 aaKnown RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 XKP51811 444 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MAXP61244 160 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MADCAM1Q13477 382 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 USF2Q15853 346 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 ANKDD1AQ495B1 522 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 RAB12Q6IQ22 244 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 PLPPR4Q7Z2D5 763 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MARCH9Q86YJ5 346 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ZNF675Q8TD23 568 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MAELQ96JY0 434 aaKnown RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 ACTR6Q9GZN1 396 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 BRD9Q9H8M2 597 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ARMC1Q9NVT9 282 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.75□□□□□ -1.011e-6■□□□□ 8.6
VCL-206ENST00000623461 FKBP7Q9Y680 259 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 LAMB4A4D0S4 1761 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MYCLP1P12525 358 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 RHBDL3P58872 404 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 TSPAN5P62079 268 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 TXNL4AP83876 142 aaKnown RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 IGFN1Q86VF2 1251 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 CPNE9Q8IYJ1 553 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 SLC7A5P1Q8MH63 180 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 SNX33Q8WV41 574 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 NCSTNQ92542 709 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 CEP295NLQ96MC4 621 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 KLHL5Q96PQ7 755 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 TTYH2Q9BSA4 534 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 AARSD1Q9BTE6 412 aaKnown RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 C2orf49Q9BVC5 232 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 CST11Q9H112 138 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 DEFB129Q9H1M3 183 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MGAT4AQ9UM21 535 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 NR2E3Q9Y5X4 410 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 MYOCOSA0A1B0GUC4 107 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 CAPN15O75808 1086 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 T-ENOLP0DO92 83 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ARRDC4Q8NCT1 418 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 OR13J1Q8NGT2 312 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 NPLQ9BXD5 320 aaPredicted RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 SEZ6LQ9BYH1 1024 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 CALML5Q9NZT1 146 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 RUVBL1Q9Y265 456 aaKnown RBP8.75□□□□□ -1.01
VCL-206ENST00000623461 ISM1B1AKI9 464 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 CDC40O60508 579 aaKnown RBP eCLIP8.75□□□□□ -1.01
VCL-206ENST00000623461 CREG1O75629 220 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 SNAP29O95721 258 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 CXCR3P49682 368 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 LAPTM5Q13571 262 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 DSC3Q14574 896 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 ZNF460Q14592 562 aa8.75□□□□□ -1.01
VCL-206ENST00000623461 LGI4Q8N135 537 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms