RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PSMG2Q969U7 264 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 C19orf60Q96EN9 201 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 TBATAQ96M53 351 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 FUNDC2Q9BWH2 189 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 AKTIPQ9H8T0 292 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 STON1Q9Y6Q2 735 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 MN1Q10571 1320 aaPredicted RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 CEP350Q5VT06 3117 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 MROH6A6NGR9 719 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 PRSS44E7EML9 344 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 M0QZQ0 153 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SLC7A4O43246 635 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 ABCB7O75027 752 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SIX3O95343 332 aaPredicted RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 YES1P07947 543 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SELLP14151 372 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 ITGA2P17301 1181 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 MAPK12P53778 367 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SH3BP2P78314 561 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 MERTKQ12866 999 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 UGT3A2Q3SY77 523 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SYCE2Q6PIF2 218 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 GDPD3Q7L5L3 318 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 RETREG3Q86VR2 466 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 CCDC36Q8IYA8 594 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 UBQLNLQ8IYU4 475 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 ARL6IP6Q8N6S5 226 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 TOP1MTQ969P6 601 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 PPWD1Q96BP3 646 aaKnown RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 SGK3Q96BR1 496 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 MFSD1Q9H3U5 465 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 ITM2CQ9NQX7 267 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 RGS18Q9NS28 235 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 UXTQ9UBK9 157 aaPredicted RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 CNOT6Q9ULM6 557 aaKnown RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 PADI3Q9ULW8 664 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 NYNRINQ9P2P1 1898 aaKnown RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 FNDC1Q4ZHG4 1894 aaPredicted RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 NR5A2O00482 541 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 AP3D1O14617 1153 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 AXIN1O15169 862 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 GPR182O15218 404 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 SYNCRIPO60506 623 aaKnown RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 GREM1O60565 184 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ZNF623O75123 536 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 CPNE3O75131 537 aaKnown RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 PRKD3O94806 890 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 WISP3O95389 354 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 IL10P22301 178 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 GPX3P22352 226 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 MAPKAPK2P49137 400 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 GPR15P49685 360 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ARPP19P56211 112 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 OR2B6P58173 313 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 CTF1Q16619 201 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 KIF19Q2TAC6 998 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 FAM45BPQ6NSW5 357 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 C8orf82Q6P1X6 216 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 ZNF773Q6PK81 442 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ABRAXAS1Q6UWZ7 409 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 DHFR2Q86XF0 187 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 UMODL1-AS1Q8N2C9 162 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 PTGR2Q8N8N7 351 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 FAM45AQ8TCE6 357 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 BIRC7Q96CA5 298 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 FBXL20Q96IG2 436 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ZNF578Q96N58 590 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 ALOXE3Q9BYJ1 711 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ZNF556Q9HAH1 456 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 PRKAG2Q9UGJ0 569 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ADGRE2Q9UHX3 823 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 MKL2Q9ULH7 1088 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 KCNE2Q9Y6J6 123 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 WASH4PA8MWX3 477 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 H3BMM5 538 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ST8SIA5O15466 376 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 TBX1O43435 398 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 NDUFS6O75380 124 aaKnown RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 PAPSS2O95340 614 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 HOXD4P09016 255 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 UGT2B10P36537 528 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ZNF267Q14586 743 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 DDR2Q16832 855 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 TYSND1Q2T9J0 566 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 VPS26BQ4G0F5 336 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 CACHD1Q5VU97 1274 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 ZNF549Q6P9A3 640 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 OFCC1Q8IZS5 231 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 PGBD5Q8N414 524 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 PNPT1Q8TCS8 783 aaKnown RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 CANT1Q8WVQ1 401 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 CIDECQ96AQ7 238 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 L3HYPDHQ96EM0 354 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 DACH2Q96NX9 599 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 SERPINB11Q96P15 392 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 TTPALQ9BTX7 342 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 TRMOQ9BU70 441 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 BRD7Q9NPI1 651 aa12.21□□□□□ -0.45
LITAF-221ENST00000622633 IFT80Q9P2H3 777 aaPredicted RBP12.21□□□□□ -0.45
LITAF-221ENST00000622633 DNAJC15Q9Y5T4 150 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms