RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TCTN2Q96GX1 697 aa23.23■■□□□ 1.31
ATXN3-253ENST00000621269 ACSS2Q9NR19 701 aa23.23■■□□□ 1.31
ATXN3-253ENST00000621269 PCMTD2Q9NV79 361 aa23.23■■□□□ 1.31
ATXN3-253ENST00000621269 OR6C2Q9NZP2 312 aa23.23■■□□□ 1.31
ATXN3-253ENST00000621269 ANAPC5Q9UJX4 755 aa23.23■■□□□ 1.31
ATXN3-253ENST00000621269 TCAF1Q9Y4C2 921 aa23.23■■□□□ 1.31
ATXN3-253ENST00000621269 CHRM5P08912 532 aaPredicted RBP23.22■■□□□ 1.31
ATXN3-253ENST00000621269 UGT2B7P16662 529 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 CSE1LP55060 971 aaKnown RBP23.22■■□□□ 1.31
ATXN3-253ENST00000621269 FOXK1P85037 733 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 ACVR1Q04771 509 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 IGFBP7Q16270 282 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 ZNF789Q5FWF6 425 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 COLEC12Q5KU26 742 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 C19orf47Q8N9M1 422 aaKnown RBP23.22■■□□□ 1.31
ATXN3-253ENST00000621269 ZNF778Q96MU6 729 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 OR2A14Q96R47 310 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 DPH2Q9BQC3 489 aaPredicted RBP23.22■■□□□ 1.31
ATXN3-253ENST00000621269 TRIM55Q9BYV6 548 aa23.22■■□□□ 1.31
ATXN3-253ENST00000621269 UBR5O95071 2799 aaPredicted RBP23.21■■□□□ 1.31
ATXN3-253ENST00000621269 ARGFXA6NJG6 315 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 ZNF749O43361 778 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 AGXTP21549 392 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 CCNG2Q16589 344 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 AARS2Q5JTZ9 985 aaKnown RBP23.21■■□□□ 1.31
ATXN3-253ENST00000621269 TRIM73Q86UV7 250 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 PEX13Q92968 403 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 ING2Q9H160 280 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 TCFL5Q9UL49 500 aa23.21■■□□□ 1.31
ATXN3-253ENST00000621269 ZSCAN5DPP0CG00 497 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 RPL22P35268 128 aaKnown RBP23.2■■□□□ 1.3
ATXN3-253ENST00000621269 CCL11P51671 97 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 HSPA14Q0VDF9 509 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 PTCHD3Q3KNS1 767 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 DNAJC21Q5F1R6 531 aaKnown RBP23.2■■□□□ 1.3
ATXN3-253ENST00000621269 PCID2Q5JVF3 399 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 CPZQ66K79 652 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 C4orf22Q6V702 233 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 ZNF534Q76KX8 674 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 GLIS1Q8NBF1 620 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 ASZ1Q8WWH4 475 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 SGSM3Q96HU1 749 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 SPHK1Q9NYA1 384 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 PLAGL1Q9UM63 463 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 SPTA1P02549 2419 aa23.2■■□□□ 1.3
ATXN3-253ENST00000621269 FLNBO75369 2602 aaKnown RBP23.19■■□□□ 1.3
ATXN3-253ENST00000621269 A0A0J9YY10 115 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 ISM1B1AKI9 464 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 C9J4A7 227 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 OR2B3O76000 313 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 RPN2P04844 631 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 TPBGLP0DKB5 382 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 CCR7P32248 378 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 PGDP52209 483 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 CHAF1BQ13112 559 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 SEMA3AQ14563 771 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 GSTA5Q7RTV2 222 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 SLC22A15Q8IZD6 547 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 SLC25A23Q9BV35 468 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 CARD6Q9BX69 1037 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 AP1M1Q9BXS5 423 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 FAM60AQ9NP50 221 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 LZTFL1Q9NQ48 299 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 CHRAC1Q9NRG0 131 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 CATSPERZQ9NTU4 200 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 DRG1Q9Y295 367 aaKnown RBP23.19■■□□□ 1.3
ATXN3-253ENST00000621269 AP1M2Q9Y6Q5 423 aa23.19■■□□□ 1.3
ATXN3-253ENST00000621269 AP3B1O00203 1094 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 APOA4P06727 396 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 PTGIRP43119 386 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 TTPAP49638 278 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 SESN2P58004 480 aaPredicted RBP23.18■■□□□ 1.3
ATXN3-253ENST00000621269 KIR2DS3Q14952 304 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 NCF4Q15080 339 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 DRICH1Q6PGQ1 229 aaPredicted RBP23.18■■□□□ 1.3
ATXN3-253ENST00000621269 FAM198BQ6UWH4 519 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 ADAMTS17Q8TE56 1095 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 MAIP1Q8WWC4 291 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 C17orf62Q9BQA9 187 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 CHRNA10Q9GZZ6 450 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 EIF2B3Q9NR50 452 aaKnown RBP23.18■■□□□ 1.3
ATXN3-253ENST00000621269 PADI2Q9Y2J8 665 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 ZKSCAN5Q9Y2L8 839 aa23.18■■□□□ 1.3
ATXN3-253ENST00000621269 CD3EAPO15446 510 aaKnown RBP23.17■■□□□ 1.3
ATXN3-253ENST00000621269 TMEM63AO94886 807 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 PDGFAP04085 211 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 CAPN1P07384 714 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 BASP1P80723 227 aaKnown RBP23.17■■□□□ 1.3
ATXN3-253ENST00000621269 TMED2Q15363 201 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 SIX1Q15475 284 aaPredicted RBP23.17■■□□□ 1.3
ATXN3-253ENST00000621269 ZIC1Q15915 447 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 SLC5A12Q1EHB4 618 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 DEFB110Q30KQ9 67 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 FAM69BQ5VUD6 431 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 LDB1Q86U70 411 aaPredicted RBP23.17■■□□□ 1.3
ATXN3-253ENST00000621269 CFAP61Q8NHU2 1237 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 FLVCR1-AS1Q8TAF5 88 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 SPRTNQ9H040 489 aaPredicted RBP23.17■■□□□ 1.3
ATXN3-253ENST00000621269 IRAK4Q9NWZ3 460 aa23.17■■□□□ 1.3
ATXN3-253ENST00000621269 PCDHGA9Q9Y5G4 932 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms