RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SH3BGRLO75368 114 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 ULK1O75385 1050 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 RNASEH2AO75792 299 aaKnown RBP9.71□□□□□ -0.86
VTA1-205ENST00000620996 LAMP2P13473 410 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 IGFBP4P22692 258 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 ME2P23368 584 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 P2RY2P41231 377 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 DPP6P42658 865 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 MTTPP55157 894 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 TRAF3Q13114 568 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 AP5B1Q2VPB7 878 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 TIGD2Q4W5G0 525 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 PLEKHS1Q5SXH7 462 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 PCYOX1LQ8NBM8 494 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 TMIEQ8NEW7 156 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 BHLHE22Q8NFJ8 381 aaPredicted RBP9.71□□□□□ -0.86
VTA1-205ENST00000620996 CSGALNACT1Q8TDX6 532 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 FOPNLQ96NB1 174 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 PRPF19Q9UMS4 504 aaKnown RBP9.71□□□□□ -0.86
VTA1-205ENST00000620996 NDUFAF1Q9Y375 327 aa9.71□□□□□ -0.86
VTA1-205ENST00000620996 ANPEPP15144 967 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 GRIA2P42262 883 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 CLCN2P51788 898 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 NEK2P51955 445 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 MRPS22P82650 360 aaKnown RBP9.7□□□□□ -0.86
VTA1-205ENST00000620996 CBX3Q13185 183 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 TMED1Q13445 227 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 CEACAM7Q14002 265 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 CCNIQ14094 377 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 LRRC74BQ6ZQY2 392 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 IFNEQ86WN2 208 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SFRP1Q8N474 314 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 CLHC1Q8NHS4 586 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 CDC26Q8NHZ8 85 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 MYOCQ99972 504 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 CCM2Q9BSQ5 444 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 ELOVL6Q9H5J4 265 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SMOXQ9NWM0 555 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 MOSPD1Q9UJG1 213 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 ATG2BQ96BY7 2078 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SCN8AQ9UQD0 1980 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 A0A1W2PP55 124 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SEC22BO75396 215 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SLC22A3O75751 556 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 AP2A2O94973 939 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 PDHA2P29803 388 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SLC7A2P52569 658 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 FCHO2Q0JRZ9 810 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 C6orf136Q5SQH8 315 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 IL23RQ5VWK5 629 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SPATA19Q7Z5L4 167 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 FUNDC1Q8IVP5 155 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 HDDC3Q8N4P3 179 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 ENDOVQ8N8Q3 282 aaKnown RBP9.7□□□□□ -0.86
VTA1-205ENST00000620996 LMNTD1Q8N9Z9 388 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SELENOMQ8WWX9 145 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 ASB11Q8WXH4 323 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SLX1AQ9BQ83 275 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 ZCCHC2Q9C0B9 1178 aaKnown RBP9.7□□□□□ -0.86
VTA1-205ENST00000620996 PCDHAC1Q9H158 963 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 TMEM245Q9H330 911 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 SLC32A1Q9H598 525 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 OBP2AQ9NY56 170 aa9.7□□□□□ -0.86
VTA1-205ENST00000620996 IGLON5A6NGN9 336 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 CCDC154A6NI56 674 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 H3BM21 787 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 SPINT1O43278 529 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 RGS14O43566 566 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 NUAK1O60285 661 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 CLDN9O95484 217 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 STAMBPO95630 424 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 CAPN3P20807 821 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 ERVK-8P63133 956 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 SFSWAPQ12872 951 aaKnown RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 NFYCQ13952 458 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 STARD3Q14849 445 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 GSTA3Q16772 222 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 CCSMST1Q4G0I0 132 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 FAM46CQ5VWP2 391 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 CYP2R1Q6VVX0 501 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 NUDT8Q8WV74 236 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 STON2Q8WXE9 905 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 TEX37Q96LM6 180 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 COQ10AQ96MF6 247 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 RIPOR3Q96MK2 946 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 SLC12A9Q9BXP2 914 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 PIF1Q9H611 641 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 S100A14Q9HCY8 104 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 STX18Q9P2W9 335 aaKnown RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 THAP10Q9P2Z0 257 aaPredicted RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 NVLO15381 856 aaKnown RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 MAP3K7O43318 606 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 CATP04040 527 aaKnown RBP9.69□□□□□ -0.86
VTA1-205ENST00000620996 G6PDP11413 515 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 VHLP40337 213 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 GALK1P51570 392 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 NAE1Q13564 534 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 TCEA2Q15560 299 aa9.69□□□□□ -0.86
VTA1-205ENST00000620996 PGM2L1Q6PCE3 622 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms