RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 STX19Q8N4C7 294 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 STAG3L4Q8TBR4 150 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 SLC47A1Q96FL8 570 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 CGREF1Q99674 301 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 WDR12Q9GZL7 423 aaKnown RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TP63Q9H3D4 680 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RNF167Q9H6Y7 350 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ZBTB20Q9HC78 741 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ATP13A1Q9HD20 1204 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 SCUBE2Q9NQ36 999 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 DYRK4Q9NR20 520 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 DNMT3BQ9UBC3 853 aaKnown RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ENPP5Q9UJA9 477 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 VPS9D1Q9Y2B5 631 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PCDHGA3Q9Y5H0 932 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 SNX8Q9Y5X2 465 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 MGAT4DA6NG13 374 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TRIM64A6NGJ6 449 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 UPK3BL1B0FP48 263 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 UPK3BL2E5RIL1 263 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 H0YAE9 185 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 BCKDKO14874 412 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RAD51BO15315 384 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 NIPSNAP2O75323 286 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 CYP7B1O75881 506 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 CDH1P12830 882 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 EFNA1P20827 205 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RAB15P59190 212 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 RPL38P63173 70 aaKnown RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 ALDH6A1Q02252 535 aaKnown RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TLE2Q04725 743 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 TP53BP2Q13625 1128 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 AP5B1Q2VPB7 878 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 AKAP14Q86UN6 197 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 SIDT2Q8NBJ9 832 aaKnown RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PDPRQ8NCN5 879 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 C3orf58Q8NDZ4 430 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 FAM83FQ8NEG4 500 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 MYLPFQ96A32 169 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 OTUB1Q96FW1 271 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-216ENST00000620854 IL37Q9NZH6 218 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 PMF1-BGLAPU3KQ54 211 aa6.83□□□□□ -1.32
NEDD9-216ENST00000620854 hCG_2039718K7EN88 272 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TLR5O60602 858 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 EFCAB14O75071 495 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 PRSS23O95084 383 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF865P0CJ78 1059 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 UMPSP11172 480 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ITGALP20701 1170 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ALFQ53S48 1182 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TYW3Q6IPR3 259 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 NUDT18Q6ZVK8 323 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 GLT6D1Q7Z4J2 308 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 EID3Q8N140 333 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 KRTCAP2Q8N6L1 136 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 LGALS12Q96DT0 336 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 L3HYPDHQ96EM0 354 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CEP44Q9C0F1 390 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 MRPL17Q9NRX2 175 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ARL5CA6NH57 179 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 E9PAM4 449 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 ASNA1O43681 348 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 LRATO95237 230 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CCL5P13501 91 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CD36P16671 472 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TGM1P22735 817 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 GPC1P35052 558 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 PPM1AP35813 382 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TM4SF4P48230 202 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 HCAR3P49019 387 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 RPS3AP61247 264 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 FAM189BP81408 668 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 SCAPQ12770 1279 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CDK5R2Q13319 367 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 IRF5Q13568 498 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TUBA3CQ13748 450 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 CRY1Q16526 586 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 MORN1Q5T089 497 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 KANK2Q63ZY3 851 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 PM20D1Q6GTS8 502 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 LAIR2Q6ISS4 152 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 Q6ZSR9 355 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 PROSER1Q86XN7 944 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 BBS7Q8IWZ6 715 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 BPIFB1Q8TDL5 484 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 EEF1AKMT1Q8WVE0 214 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 HDAC2Q92769 488 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 SERPINB11Q96P15 392 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 MBOAT4Q96T53 435 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TDRD1Q9BXT4 1180 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 EMILIN2Q9BXX0 1053 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 YTHDF1Q9BYJ9 559 aaKnown RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 MAGEE1Q9HCI5 957 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 TMLHEQ9NVH6 421 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 AIG1Q9NVV5 245 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 C14orf119Q9NWQ9 140 aa6.82□□□□□ -1.32
NEDD9-216ENST00000620854 H2AFY2Q9P0M6 372 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 KIAA1522Q9P206 1035 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-216ENST00000620854 C3orf18Q9UK00 162 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms