RNA–Protein interactions for RNA: ENST00000618521.4

SH2B1-216, Transcript of SH2B adaptor protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH2B1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-216ENST00000618521 FBXO22Q8NEZ5 403 aa17.14■□□□□ 0.33
SH2B1-216ENST00000618521 TMEM74Q96NL1 305 aa17.14■□□□□ 0.33
SH2B1-216ENST00000618521 ATOH8Q96SQ7 321 aa17.14■□□□□ 0.33
SH2B1-216ENST00000618521 IKZF3Q9UKT9 509 aa17.14■□□□□ 0.33
SH2B1-216ENST00000618521 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 MYO16Q9Y6X6 1858 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 PCM1Q15154 2024 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 NTRK1P04629 796 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 CLTBP09497 229 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 PRDX3P30048 256 aaKnown RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 LBX1P52954 281 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 LIPEQ05469 1076 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 C10orf120Q5SQS8 335 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 CELF2-AS1Q8N7Q2 184 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 PAPD5Q8NDF8 572 aaKnown RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 PSD4Q8NDX1 1056 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 PHF10Q8WUB8 498 aaKnown RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 FAR1Q8WVX9 515 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 SLC7A5P2Q9GIP4 190 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 SLIRPQ9GZT3 109 aaKnown RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 SDR39U1Q9NRG7 319 aaPredicted RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 FAM118AQ9NWS6 357 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 SLAMF8Q9P0V8 285 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 CRNNQ9UBG3 495 aaPredicted RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 PCDHA9Q9Y5H5 950 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 WASH4PA8MWX3 477 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 UPK1AO00322 258 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 MUSKO15146 869 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 XPNPEP2O43895 674 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 SNX2O60749 519 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 CRCPO75575 148 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 MAP2K4P45985 399 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 TBX4P57082 545 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 NFYCQ13952 458 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 MRPL58Q14197 206 aaKnown RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 RAP1GAP2Q684P5 730 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 ZNF683Q8IZ20 524 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 ADPRHL2Q9NX46 363 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 EVLQ9UI08 416 aaPredicted RBP17.13■□□□□ 0.33
SH2B1-216ENST00000618521 SZT2Q5T011 3432 aa17.13■□□□□ 0.33
SH2B1-216ENST00000618521 RHOQP17081 205 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ATF6P18850 670 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ACVRL1P37023 503 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 PAGE3Q5JUK9 113 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 BLOC1S3Q6QNY0 202 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 PAQR3Q6TCH7 311 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 CCBE1Q6UXH8 406 aaPredicted RBP17.12■□□□□ 0.33
SH2B1-216ENST00000618521 HS3ST5Q8IZT8 346 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 RPL3LQ92901 407 aaKnown RBP17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ESAMQ96AP7 390 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 TMEM125Q96AQ2 219 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ASPSCR1Q9BZE9 553 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 AMBRA1Q9C0C7 1298 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 CRISPLD2Q9H0B8 497 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 CWH43Q9H720 699 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 NECTIN3Q9NQS3 549 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ZNF221Q9UK13 617 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 EIF3LQ9Y262 564 aaKnown RBP17.12■□□□□ 0.33
SH2B1-216ENST00000618521 LOC285095A0A1B0GVY8 99 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ISPDA4D126 451 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 SLC1A7O00341 560 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 COL6A1P12109 1028 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 GNG2P59768 71 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ZCCHC8Q6NZY4 707 aaKnown RBP17.12■□□□□ 0.33
SH2B1-216ENST00000618521 CCDC81Q6ZN84 652 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 P2RY8Q86VZ1 359 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 DCBLD1Q8N8Z6 715 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.12■□□□□ 0.33
SH2B1-216ENST00000618521 SLC39A13Q96H72 371 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 C1orf74Q96LT6 269 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 MRPL9Q9BYD2 267 aaKnown RBP17.12■□□□□ 0.33
SH2B1-216ENST00000618521 SLC52A3Q9NQ40 469 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 TLR6Q9Y2C9 796 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ACTL7AQ9Y615 435 aa17.12■□□□□ 0.33
SH2B1-216ENST00000618521 ASPDHA6ND91 283 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 SYCE1LA8MT33 242 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 TBC1D4O60343 1298 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 IFNA8P32881 189 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 AGTR2P50052 363 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 P2RX3P56373 397 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 ATAD3CQ5T2N8 411 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 MRNIPQ6NTE8 343 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 FBXL22Q6P050 247 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 MSANTD2Q6P1R3 559 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 DEPDC4Q8N2C3 294 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 MCFD2Q8NI22 146 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 RORBQ92753 470 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 TMEM248Q9NWD8 314 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 RNF112Q9ULX5 631 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 MICAL3Q7RTP6 2002 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 FMO4P31512 558 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 GPR17Q13304 367 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 TSNQ15631 228 aaKnown RBP17.11■□□□□ 0.33
SH2B1-216ENST00000618521 FAM20CQ8IXL6 584 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 FBXO39Q8N4B4 442 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 SPERTQ8NA61 448 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 IGSF21Q96ID5 467 aa17.11■□□□□ 0.33
SH2B1-216ENST00000618521 ASB2Q96Q27 587 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms